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Drug screening in human physiologic medium identifies uric acid as an inhibitor of rigosertib efficacy
Vipin Rawat, Patrick DeLear, Prarthana Prashanth, Mete Emir Ozgurses, Anteneh Tebeje, Philippa A. Burns, Kelly O. Conger, Christopher Solís, Yasir Hasnain, Anna Novikova, Jennifer E. Endress, Paloma González-Sánchez, Wentao Dong, Greg Stephanopoulos, Gina M. DeNicola, Isaac S. Harris, David Sept, Frank M. Mason, Jonathan L. Coloff
Vipin Rawat, Patrick DeLear, Prarthana Prashanth, Mete Emir Ozgurses, Anteneh Tebeje, Philippa A. Burns, Kelly O. Conger, Christopher Solís, Yasir Hasnain, Anna Novikova, Jennifer E. Endress, Paloma González-Sánchez, Wentao Dong, Greg Stephanopoulos, Gina M. DeNicola, Isaac S. Harris, David Sept, Frank M. Mason, Jonathan L. Coloff
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Research Article Cell biology Oncology

Drug screening in human physiologic medium identifies uric acid as an inhibitor of rigosertib efficacy

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Abstract

The nonphysiological nutrient levels found in traditional culture media have been shown to affect numerous aspects of cancer cell physiology, including how cells respond to certain therapeutic agents. Here, we comprehensively evaluated how physiological nutrient levels affect therapeutic response by performing drug screening in human plasma-like medium. We observed dramatic nutrient-dependent changes in sensitivity to a variety of FDA-approved and clinically trialed compounds, including rigosertib, an experimental cancer therapeutic that recently failed in phase III clinical trials. Mechanistically, we found that the ability of rigosertib to destabilize microtubules is strongly inhibited by the purine metabolism end product uric acid, which is uniquely abundant in humans relative to traditional in vitro and in vivo cancer models. These results demonstrate the broad and dramatic effects nutrient levels can have on drug response and how incorporation of human-specific physiological nutrient medium might help identify compounds whose efficacy could be influenced in humans.

Authors

Vipin Rawat, Patrick DeLear, Prarthana Prashanth, Mete Emir Ozgurses, Anteneh Tebeje, Philippa A. Burns, Kelly O. Conger, Christopher Solís, Yasir Hasnain, Anna Novikova, Jennifer E. Endress, Paloma González-Sánchez, Wentao Dong, Greg Stephanopoulos, Gina M. DeNicola, Isaac S. Harris, David Sept, Frank M. Mason, Jonathan L. Coloff

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Figure 5

Uric acid inhibits rigosertib activity by reducing the affinity of rigosertib for β-tubulin.

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Uric acid inhibits rigosertib activity by reducing the affinity of rigos...
(A) Structural comparisons of colchicine-bound and rigosertib-bound tubulin. Colchicine and rigosertib are colored orange and cyan, respectively. The salt bridge between βE328 and αR221 found in the colchicine structure is absent in the rigosertib structure, allowing H10 (shown in green) to move away from the dimer body and create a pocket for uric acid (shown in yellow) to bind. (B) Distance between βE328 and αR221 in the colchicine and rigosertib simulations. When this ionic bond is not formed, H10 becomes untethered, which creates the binding pocket for uric acid. (C) Molecular details of uric acid binding in the pocket between H10 (green) and S9 (magenta). Residues that form hydrogen bonds with uric acid are labeled. (D) CETSA analysis of K562 cells treated for 4 hours with 40 μM pharmaceutical-grade rigosertib in RPMI at the indicated temperature. (E) Quantification of β-tubulin melting at increasing temperature in the absence of uric acid and rigosertib. N = 5 independent experiments. (F) Quantification of β-tubulin at 60°C in the presence and absence of rigosertib and uric acid. Data are represented as means ± SD of 5 independent experiments. **P < 0.01 from unpaired 2-tailed t test. (G) Unlike mice and other model organisms and systems, humans do not express uricase, resulting in uniquely high uric acid levels.

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