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Gene pathway development in human epicardial adipose tissue during early life
Shalini Ojha, … , Michael E. Symonds, Helen Budge
Shalini Ojha, … , Michael E. Symonds, Helen Budge
Published August 18, 2016
Citation Information: JCI Insight. 2016;1(13):e87460. https://doi.org/10.1172/jci.insight.87460.
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Research Article Development

Gene pathway development in human epicardial adipose tissue during early life

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Abstract

Studies in rodents and newborn humans demonstrate the influence of brown adipose tissue (BAT) in temperature control and energy balance and a critical role in the regulation of body weight. Here, we obtained samples of epicardial adipose tissue (EAT) from neonates, infants, and children in order to evaluate changes in their transcriptional landscape by applying a systems biology approach. Surprisingly, these analyses revealed that the transition to infancy is a critical stage for changes in the morphology of EAT and is reflected in unique gene expression patterns of a substantial proportion of thermogenic gene transcripts (~10%). Our results also indicated that the pattern of gene expression represents a distinct developmental stage, even after the rebound in abundance of thermogenic genes in later childhood. Using weighted gene coexpression network analyses, we found precise anthropometric-specific correlations with changes in gene expression and the decline of thermogenic capacity within EAT. In addition, these results indicate a sequential order of transcriptional events affecting cellular pathways, which could potentially explain the variation in the amount, or activity, of BAT in adulthood. Together, these results provide a resource to elucidate gene regulatory mechanisms underlying the progressive development of BAT during early life.

Authors

Shalini Ojha, Hernan P. Fainberg, Victoria Wilson, Giuseppe Pelella, Marcos Castellanos, Sean T. May, Attilio A. Lotto, Harold Sacks, Michael E. Symonds, Helen Budge

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Figure 6

Cytoscape pathway analysis of the change in primary networks within epicardial adipose tissue (EAT) with age and schematic summary of changes in adipose tissue composition, structure, and primary regulatory pathways.

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Cytoscape pathway analysis of the change in primary networks within epic...
Comparative subnetwork visualization for hub gene modular topology in (A) neonates and (B) infants. Complete networks for each age group are shown in the smaller diagram in each panel. Layouts are based on “organic distribution,” and gene node shading depicts gene expression fold change. Red and green denote positive and negative gene expression, respectively. Relative numbers of direct gene interactions are indicated by node size and edge color (from positive [red lines] to negative [green lines]). These describe the extent (strength, intensity, or capacity) of interactions between two genes (weighted correlation). (C) Summary of effects on transcriptional architecture that accompany age from the neonatal period into childhood.

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