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Gene pathway development in human epicardial adipose tissue during early life
Shalini Ojha, … , Michael E. Symonds, Helen Budge
Shalini Ojha, … , Michael E. Symonds, Helen Budge
Published August 18, 2016
Citation Information: JCI Insight. 2016;1(13):e87460. https://doi.org/10.1172/jci.insight.87460.
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Research Article Development

Gene pathway development in human epicardial adipose tissue during early life

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Abstract

Studies in rodents and newborn humans demonstrate the influence of brown adipose tissue (BAT) in temperature control and energy balance and a critical role in the regulation of body weight. Here, we obtained samples of epicardial adipose tissue (EAT) from neonates, infants, and children in order to evaluate changes in their transcriptional landscape by applying a systems biology approach. Surprisingly, these analyses revealed that the transition to infancy is a critical stage for changes in the morphology of EAT and is reflected in unique gene expression patterns of a substantial proportion of thermogenic gene transcripts (~10%). Our results also indicated that the pattern of gene expression represents a distinct developmental stage, even after the rebound in abundance of thermogenic genes in later childhood. Using weighted gene coexpression network analyses, we found precise anthropometric-specific correlations with changes in gene expression and the decline of thermogenic capacity within EAT. In addition, these results indicate a sequential order of transcriptional events affecting cellular pathways, which could potentially explain the variation in the amount, or activity, of BAT in adulthood. Together, these results provide a resource to elucidate gene regulatory mechanisms underlying the progressive development of BAT during early life.

Authors

Shalini Ojha, Hernan P. Fainberg, Victoria Wilson, Giuseppe Pelella, Marcos Castellanos, Sean T. May, Attilio A. Lotto, Harold Sacks, Michael E. Symonds, Helen Budge

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Figure 2

Differential gene expression at distinct developmental periods in epicardial adipose tissue (EAT).

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Differential gene expression at distinct developmental periods in epicar...
(A) Venn diagram summarizing the number of differentially regulated genes between neonatal and infant EAT (red) versus that between infants and children (green). (B) Top 5 differentially expressed genes during the transition from the neonatal period to infancy (eBayes moderated t statistics) and (E) from the neonatal period to childhood. (C) Genes with the largest decline in expression between the neonatal period and infancy and (F) between neonates and children (gray background: downregulated genes with more than 2.5 log2 fold change and FDR q > 0.05. (D) Top 5 genes with the greatest increases in gene expression between the neonatal period and infancy and (G) between the neonatal period to childhood samples. (H and I) Volcano plots showing changes in EAT gene expression between (H) neonatal period and infancy and (I) infancy and childhood (cutoffs: log fold change = 1, log P = 1.3, q < 0.05, FDR correction; eBayes moderated t statistics).

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