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Hypomorphic Lig4 gene mutation in mice predisposes to Th1-skewed intestinal inflammation
Yusuke Yamashita, Hideki Kosako, Takashi Kato, Izumi Sasaki, Sadahiro Iwabuchi, Yuri Fukuda-Ohta, Tadashi Okamura, Misato Tane, Shotaro Tabata, Kazutaka Nakashima, Ken Tanaka, Kazunori Shiraishi, Yuki Uchihara, Daisuke Okuzaki, Kyoichi Isono, Atsushi Shibata, Tsunehiro Mizushima, Hiroaki Hemmi, Nobuo Kanazawa, Seiji Kodama, Hiroaki Miyoshi, Koichi Ohshima, Shinichi Hashimoto, Yoshio Fujitani, Takashi Sonoki, Shinobu Tamura, Tsuneyasu Kaisho
Yusuke Yamashita, Hideki Kosako, Takashi Kato, Izumi Sasaki, Sadahiro Iwabuchi, Yuri Fukuda-Ohta, Tadashi Okamura, Misato Tane, Shotaro Tabata, Kazutaka Nakashima, Ken Tanaka, Kazunori Shiraishi, Yuki Uchihara, Daisuke Okuzaki, Kyoichi Isono, Atsushi Shibata, Tsunehiro Mizushima, Hiroaki Hemmi, Nobuo Kanazawa, Seiji Kodama, Hiroaki Miyoshi, Koichi Ohshima, Shinichi Hashimoto, Yoshio Fujitani, Takashi Sonoki, Shinobu Tamura, Tsuneyasu Kaisho
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Research Article Immunology Inflammation

Hypomorphic Lig4 gene mutation in mice predisposes to Th1-skewed intestinal inflammation

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Abstract

DNA ligase IV (LIGIV or LIG4) is essential for DNA double-strand break (DSB) repair. Hypomorphic LIG4 variants cause LIG4 syndrome, characterized by growth disturbance, increased radiosensitivity, predisposition to malignancies, adaptive immunodeficiency, and inflammatory conditions. Most of these manifestations are recapitulated in hypomorphic Lig4 mutant mice. However, no model mice with defective DSB repair have consistently exhibited inflammation. Here, we generated mutant mice carrying the LIG4 missense variant, p.W447C, found in a patient with LIG4 syndrome. Lig4W447C/W447C mice showed functional defects of LIGIV and manifested growth retardation, increased radiosensitivity, and life-threatening intestinal inflammation under severe adaptive immunodeficiency. The inflammation was dependent on lymphocytes and characterized by marked infiltration of Th1 cells and macrophages, along with elevated expression of IFN-γ–inducible genes. When Ifng was deleted, Th2 and Th17 instead of Th1 cells drove the inflammation. Single-cell RNA-seq analyses with TCR repertoire revealed that T cells from Lig4W447C/W447C mice preferentially used proximal Vα and Jα segments in V regions of TCRα chains and exhibited expansion of several clonotypes, a substantial portion of which were CD4+ T cells expressing IFN-γ. Thus, our hypomorphic Lig4 mutant mice represent a unique model for studying Th1-skewed intestinal inflammation under severe adaptive immunodeficiency.

Authors

Yusuke Yamashita, Hideki Kosako, Takashi Kato, Izumi Sasaki, Sadahiro Iwabuchi, Yuri Fukuda-Ohta, Tadashi Okamura, Misato Tane, Shotaro Tabata, Kazutaka Nakashima, Ken Tanaka, Kazunori Shiraishi, Yuki Uchihara, Daisuke Okuzaki, Kyoichi Isono, Atsushi Shibata, Tsunehiro Mizushima, Hiroaki Hemmi, Nobuo Kanazawa, Seiji Kodama, Hiroaki Miyoshi, Koichi Ohshima, Shinichi Hashimoto, Yoshio Fujitani, Takashi Sonoki, Shinobu Tamura, Tsuneyasu Kaisho

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Figure 2

B and T cell differentiation was impaired in Lig4W447C/W447C mice.

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B and T cell differentiation was impaired in Lig4W447C/W447C mice.
(A) H...
(A) H&E staining revealed hypocellular marrow in BM of Lig4W447C/W447C mice compared with that of Lig4+/+ mice. Scale bar: 60 μm. (B) Number of BM cells (Lig4+/+, n = 7; Lig4W447C/W447C, n = 7; 7–23 weeks). (C) FACS analysis of BM cells labeled with B220, IgM, and CD43 antibodies. (D) Number and percentage of B cells in BM (Lig4+/+, n = 5; Lig4W447C/W447C, n = 5; 8–30 weeks). (E) H&E staining of spleen. Scale bar: 300 μm. (F) Splenocyte numbers (Lig4+/+, n = 15; Lig4W447C/W447C, n = 15; 7–20 weeks). (G) FACS analysis of splenocytes labeled with CD3 and B220 antibodies. (H) Absolute number and percentage of B220+ splenocytes analyzed by FACS (Lig4+/+, n = 8; Lig4W447C/W447C, n = 8; 7–20 weeks). (I) Serum Ig levels (Lig4+/+, n = 6; Lig4W447C/W447C, n = 6; 9–12 weeks). (J) Thymic hypoplasia in a 6-week-old Lig4W447C/W447C mouse. The graph depicts the number of thymocytes (Lig4+/+, n = 7; Lig4W447C/W447C, n = 7; 8–23 weeks). (K) H&E staining of thymus. Scale bar: 300 μm. (L) FACS analysis of thymocytes labeled with CD3, CD4, and CD8 antibodies. (M) T cell subset numbers in thymocytes, including DN, DP, and SP (Lig4+/+, n = 4; Lig4W447C/W447C, n = 4; 7–16 weeks). (N) Number and percentage of CD3+ splenocytes (Lig4+/+, n = 7; Lig4W447C/W447C, n = 7; 8–11 weeks). (O) FACS analysis of splenocytes labeled with CD3, CD4, and CD8 antibodies. (P) Absolute numbers of CD4+ and CD8+ splenocytes (Lig4+/+, n = 7; Lig4W447C/W447C, n = 7; 8–32 weeks). (Q) CD4/CD8 ratio of CD3+ spleen T cells (Lig4+/+, n = 7; Lig4W447C/W447C, n = 7; 8–32 weeks). (R) FACS analysis of CD44 and CD62L in splenic CD4+ and CD8+ T cells. (S) Percentages of naive, central memory (CMT), and effector memory (EMT) T cell subsets (Lig4+/+, n = 5; Lig4W447C/W447C, n = 5; 9–10 weeks). Data are presented as mean ± SEM. **P < 0.01, ***P < 0.001.

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