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Targeting eIF4A-dependent translation in genetically complex sarcoma
Young-Mi Kim, Prathibha Mohan, Urmila Sehrawat, Evan Seffar, Rafaela Muniz De Queiroz, Kalyani Chadalavada, Nikita Persaud, Tomoyo Okada, Anirudh Kulkarni, Jianan Lin, Nathalie Lailler, Shaleigh Smith, Bhumika Jadeja, Nicholas D. Socci, Zhengqing Ouyang, Hans-Guido Wendel, Samuel Singer
Young-Mi Kim, Prathibha Mohan, Urmila Sehrawat, Evan Seffar, Rafaela Muniz De Queiroz, Kalyani Chadalavada, Nikita Persaud, Tomoyo Okada, Anirudh Kulkarni, Jianan Lin, Nathalie Lailler, Shaleigh Smith, Bhumika Jadeja, Nicholas D. Socci, Zhengqing Ouyang, Hans-Guido Wendel, Samuel Singer
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Research Article Cell biology Oncology

Targeting eIF4A-dependent translation in genetically complex sarcoma

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Abstract

Dedifferentiated liposarcoma (DDLS), myxofibrosarcoma (MFS), and undifferentiated pleomorphic sarcoma (UPS) are the most common types of genetically complex sarcoma. There is an urgent need to develop effective targeted therapy for these deadly sarcoma types. Despite their genetic complexity, these sarcomas share genomic alterations causing PI3K/Akt/mTOR and MAPK pathway activation, and both pathways control translation mediated by the RNA helicase eIF4A. We therefore investigated eIF4A inhibition as a therapeutic strategy. The eIF4A inhibitor CR-1-31B effectively suppressed tumor growth and induced apoptosis in DDLS, MFS, and UPS patient–derived cell lines and mouse xenografts. Transcriptome-scale ribosome footprinting identified eIF4A-dependent mRNAs such as the Hippo pathway transcriptional coactivators YAP1 (YAP) and WWTR1 (TAZ). Combined knockdown of YAP and TAZ induced apoptosis in DDLS, MFS, and UPS cell lines, and their ectopic expression partially rescued cells from apoptosis induced by CR-1-31B. Genomic analysis of patient tumors revealed that YAP and WWTR1 were frequently amplified or gained in DDLS, MFS, and UPS and were associated with worse clinical outcomes. Together, our findings identify a strategy for targeting the Hippo pathway in incurable forms of sarcoma based on inhibition of eIF4A-dependent translation of the key oncogenic transcription factors YAP and TAZ.

Authors

Young-Mi Kim, Prathibha Mohan, Urmila Sehrawat, Evan Seffar, Rafaela Muniz De Queiroz, Kalyani Chadalavada, Nikita Persaud, Tomoyo Okada, Anirudh Kulkarni, Jianan Lin, Nathalie Lailler, Shaleigh Smith, Bhumika Jadeja, Nicholas D. Socci, Zhengqing Ouyang, Hans-Guido Wendel, Samuel Singer

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Figure 4

[-]CR-1-31B decreases expression of YAP, TAZ, and TEAD1 in MFS/UPS cells.

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[-]CR-1-31B decreases expression of YAP, TAZ, and TEAD1 in MFS/UPS cells...
(A) Proliferation of MFS (MFS8000s, MFS9100-2B) and UPS (UPS3673-4, UPS4746) cells after incubation with the indicated concentrations of [-]CR-1-31B for 72 hours as assessed by CyQUANT assay. (B) Apoptosis of MFS/UPS cells 72 hours after [-]CR-1-31B treatment as indicated by annexin V and 7-AAD costaining. (C) Western blots for YAP, TAZ, TEAD1, and the apoptosis markers cleaved PARP and cleaved caspase-7 in MFS/UPS cells treated with [-]CR-1-31B for 72 hours. Vinculin was used as a loading control. (D) mRNA expression of CTGF and CYR61 in MFS/UPS cells treated with [-]CR-1-31B for 72 hours as assessed by qPCR. **P < 0.01; ***P < 0.001 by 1-way ANOVA with Dunnett’s post hoc test in B and 2-way ANOVA with Tukey’s post hoc test in D.

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