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Prenatal SMN-dependent defects in translation uncover reversible primary cilia phenotypes in spinal muscular atrophy
Federica Genovese, … , Gabriella Viero, Thomas H. Gillingwater
Federica Genovese, … , Gabriella Viero, Thomas H. Gillingwater
Published September 9, 2025
Citation Information: JCI Insight. 2025;10(20):e192835. https://doi.org/10.1172/jci.insight.192835.
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Research Article Development Neuroscience

Prenatal SMN-dependent defects in translation uncover reversible primary cilia phenotypes in spinal muscular atrophy

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Abstract

Spinal muscular atrophy (SMA) is a neuromuscular disease caused by low levels of survival motor neuron (SMN) protein. Several therapeutic approaches boosting SMN are approved for human patients, delivering remarkable improvements in lifespan and symptoms. However, emerging phenotypes, including neurodevelopmental comorbidities, are being reported in some treated patients with SMA, indicative of alterations in brain development. Here, using a mouse model of severe SMA, we revealed an underlying neurodevelopmental phenotype in SMA where prenatal SMN-dependent defects in translation drove disruptions in nonmotile primary cilia across the central nervous system (CNS). Low levels of SMN caused widespread perturbations in translation at E14.5 targeting genes associated with primary cilia. The density of primary cilia in vivo, as well as cilial length in vitro, was significantly decreased in prenatal SMA mice. Proteomic analysis revealed downstream perturbations in primary cilia-regulated signaling pathways, including Wnt signaling. Cell proliferation was concomitantly reduced in the hippocampus of SMA mice. Prenatal transplacental therapeutic intervention with SMN-restoring risdiplam rescued primary cilia defects in SMA mouse embryos. Thus, SMN protein is required for normal cellular and molecular development of primary cilia in the CNS. Early, systemic treatment with SMN-restoring therapies can successfully target neurodevelopmental comorbidities in SMA.

Authors

Federica Genovese, Yu-Ting Huang, Anna A.L. Motyl, Martina Paganin, Gaurav Sharma, Ilaria Signoria, Deborah Donzel, Nicole C.H. Lai, Marie Pronot, Rachel A. Kline, Helena Chaytow, Kimberley J. Morris, Kiterie M.E. Faller, Thomas M. Wishart, Ewout J.N. Groen, Michael A. Cousin, Gabriella Viero, Thomas H. Gillingwater

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Figure 2

Translational defects in primary cilia genes in the CNS of SMA mouse embryos.

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Translational defects in primary cilia genes in the CNS of SMA mouse emb...
(A) Bar chart showing the dysregulated genes associated to the cilium assembly canonical pathway identified by IPA. Light purple bars represent downregulated DEGs; dark purple bars represent upregulated DEGs. (B) Schematic of a primary cilium highlighting the main structural components: intraflagellar transport (IFT) proteins complex A and B, transition zone and fibers, basal body, and cell membrane. (C) Functional enrichment analysis network of cilium assembly DEGs. Downregulated molecules in light purple; upregulated molecules in dark purple. Different shapes indicate molecules with distinct biological functions. Black arrows show the enrichment of individual molecules to the functional terms formation of cilia and assembly of non-motile cilium. Blue arrows indicate a predicted inhibition state on the specific functional term. Both functional terms are highlighted in blue, indicating an overall inhibition. Statistical significance was defined using the following cutoff values: log2FC_thr = 0.3 and pval_thr = 0.05. P values were derived using the glmQLFTest function in edgeR. *P value ≤ 0.05, **P value ≤ 0.01, ***P value ≤ 0.001.

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