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TNF-α represses fibroblast to myofibroblast transition through the histone methyltransferase Setdb2
Tyler M. Bauer, Kevin D. Mangum, Samuel D. Buckley, James Shadiow, Amrita D. Joshi, Christopher O. Audu, Jadie Y. Moon, Lindsey D. Hughes, Rachel Bogel, Lam C. Tsoi, Qinmennge Li, He Zhang, Steven Kunkel, Johann E. Gudjonsson, Frank M. Davis, Katherine A. Gallagher
Tyler M. Bauer, Kevin D. Mangum, Samuel D. Buckley, James Shadiow, Amrita D. Joshi, Christopher O. Audu, Jadie Y. Moon, Lindsey D. Hughes, Rachel Bogel, Lam C. Tsoi, Qinmennge Li, He Zhang, Steven Kunkel, Johann E. Gudjonsson, Frank M. Davis, Katherine A. Gallagher
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Research Article Dermatology Immunology

TNF-α represses fibroblast to myofibroblast transition through the histone methyltransferase Setdb2

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Abstract

Fibroblast to myofibroblast transition is a critical event required for effective tissue repair. In pathologic wound repair processes, such as type 2 diabetes (T2D), fibroblast to myofibroblast transition is impaired. The exact factors that control this transition in wounds are unclear. Here, using human tissue and murine transgenic models, we show that the histone methyltransferase SETDB2 is elevated in diabetic wound fibroblasts and TNF-α represses fibroblast to myofibroblast transition via Setdb2. We identified that TNF-α increases Setdb2 in fibroblasts via a JAK1,3/STAT3 signaling pathway, where pharmacologic or genetic manipulation of this pathway altered Setdb2 in fibroblasts. We also found that fibroblasts treated with pro-inflammatory macrophage supernatants displayed increased Setdb2 and downregulated myofibroblast genes; inhibition of the TNF-α receptor reduced the upregulation of Setdb2. In diabetes, we showed that TNF-α signaling was increased in wound fibroblasts, which functions to increase Setdb2 expression and represses fibroblast to myofibroblast transition. Fibroblast-specific knockdown of SETDB2 and therapeutic inhibition of JAK1,3/STAT3 improved diabetic wound repair, where wound fibroblasts expressed increased myofibroblast genes. This study is the first to our knowledge to identify an epigenetic mechanism for reduced fibroblast to myofibroblast transition in diabetic wounds. Therapeutic targeting of the TNF-α/STAT3/SETDB2 axis in wound fibroblasts may improve diabetic wound healing.

Authors

Tyler M. Bauer, Kevin D. Mangum, Samuel D. Buckley, James Shadiow, Amrita D. Joshi, Christopher O. Audu, Jadie Y. Moon, Lindsey D. Hughes, Rachel Bogel, Lam C. Tsoi, Qinmennge Li, He Zhang, Steven Kunkel, Johann E. Gudjonsson, Frank M. Davis, Katherine A. Gallagher

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Figure 2

SETDB2-deficient fibroblasts express increased myofibroblast genes.

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SETDB2-deficient fibroblasts express increased myofibroblast genes.
(A) ...
(A) Setdb2 gene expression in wound fibroblasts isolated from unwounded dermis of wild-type mice following 72 hours of siRNA transfection with nontargeting, negative control (siNTC) or siRNA specific to Setdb2 (40 nM) (n = 5 mice/group, run in triplicate). (B) Acta2, Tagln, Myl9, and Cald1 gene expression in wound fibroblasts isolated from day 7 of wild-type mice following 72 hours of siRNA transfection with siNTC or siRNA specific to Setdb2 (40 nM) (n = 5 mice/group, run in triplicate). (C) Acta2, Tagln, Myl9, and Cald1 gene expression in dermal fibroblasts isolated from Setdb2fl/fl ColCreERT–/– and Setdb2fl/fl ColCreERT+/+ (n = 5 mice/group, run in triplicate). (D) Real-time qPCR values for chromatin immunoprecipitation (ChIP) for H3K9me3 at the promoters of Acta2, Tagln, Myl9, and Cald1 genes following 6 hours of TNF-α stimulation of Setdb2fl/fl ColCreERT–/– and Setdb2fl/fl ColCreERT+/+ dermal fibroblasts (n = 5 mice/group, run in triplicate). (E) Cluster analysis UMAP of single-cell RNA sequencing from Setdb2fl/fl ColCreERT–/– and Setdb2fl/fl ColCreERT+/+ day 7 wounds showed 5 unique fibroblast cell clusters (representative). Dot plots detailing ACTA2, TAGLN, CALD1, and MYL9 gene expression between Setdb2fl/fl ColCreERT–/– and Setdb2fl/fl ColCreERT+/+ day 7 murine wound fibroblasts (n = 3 per group). (F) Histograms showing the proportion of fibroblasts by subtype in day 7 wounds isolated from Setdb2fl/fl ColCreERT–/– and Setdb2fl/fl ColCreERT+/+ (n = 3 per group). *P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001. Data are presented as the mean ± SEM. Data were first analyzed for normal distribution, and if data passed the normality test, 2-tailed Student’s t test was used. Panel A utilized Tukey’s multiple-comparison test, with a single pooled variance. Representative figures are displayed for panel A–D, which were repeated 3 times independently.

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