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SRSF3-TRIM28-MDC1 prevents DNA damage caused by R-loops in fatty liver disease in mice
Panyisha Wu, Manasi Das, Yanting Wang, Yichun Ji, Yuli Wu, Deepak Kumar, Lily J. Jih, Nicholas J.G. Webster
Panyisha Wu, Manasi Das, Yanting Wang, Yichun Ji, Yuli Wu, Deepak Kumar, Lily J. Jih, Nicholas J.G. Webster
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Research Article Endocrinology Hepatology

SRSF3-TRIM28-MDC1 prevents DNA damage caused by R-loops in fatty liver disease in mice

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Abstract

Serine-rich splicing factor 3 (SRSF3) is crucial for the metabolic functions of the liver. The genetic deletion of SRSF3 in mouse hepatocytes impairs hepatic lipid and glucose metabolism and leads to fibrosis and formation of hepatocellular adenoma that progresses to hepatocellular carcinoma. SRSF3 protein is proteosomally degraded in metabolic-dysfunction associated fatty liver disease (MAFLD) and metabolic-dysfunction-associated steatohepatitis (MASH). We show here that depleting SRSF3 protein in hepatocytes promoted R-loop accumulation and increased DNA damage in the liver. Prevention of SRSF3 degradation in vivo protected hepatocytes from DNA double-strand breaks in mice with MASH. This protection extended to other DNA-damaging agents such as camptothecin, palmitic acid, or hydrogen peroxide when tested on HepG2 cells in vitro. SRSF3 interacted with TRIM28 and MDC1, which are components of the ATM DNA-damage repair complex, and knockdown of any of these 3 proteins reduced the expression of the other 2 proteins, suggesting they form a functional complex. Lastly, by preventing degradation of SRSF3, we were able to reduce tumors in a diethyl-nitrosamine–induced (DEN-induced) model of cirrhotic HCC. These findings suggest that maintenance of SRSF3 protein stability is crucial for preventing DNA damage and protecting liver from early metabolic liver disease and progression to HCC.

Authors

Panyisha Wu, Manasi Das, Yanting Wang, Yichun Ji, Yuli Wu, Deepak Kumar, Lily J. Jih, Nicholas J.G. Webster

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Figure 2

Preventing SRSF3 degradation reduces HepG2 cell DNA damage in vitro.

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Preventing SRSF3 degradation reduces HepG2 cell DNA damage in vitro.
(A)...
(A) Immunofluorescence staining for γH2ax in HepG2 cells (green) treated with control or SRSF3 siRNA (20 nM, 48 hours). DAPI was strained to visualize the nuclei (blue). Panels show γH2AX fluorescence alone or merged with DAPI. Scale bar: 100 μm. (B) Immunoblotting of SRSF3, γH2ax, 53BP1, and BRCA1 from human hepatocytes with or without SRSF3 knockdown. Gels were run in parallel, and individual actin control blots are shown. (C) Graphs showing percentage of γH2ax+ nuclei by immunofluorescence (n = 3/group) or SRSF3, γH2ax, 53BP1, and BRCA1 protein levels normalized to β-actin by Western blot (n = 3/group). (D–F) HepG2 cells were infected with AAV8 expressing GFP, SRSF3-WT, SRSF3-K11R directly at MOI 500,000 for 48 hours. γH2ax was detected by immunofluorescence (red) following induction of DNA damage with 0.1 μM CPT for 1 hour (D), 500 μM PA for 12 hours (E), or 200 μM H2O2 for 1 hour (F). Nuclei were counterstained with DAPI (blue). Scale bars: 100 μm. Graphs show quantification of γH2ax+ nuclei/field by immunofluorescence (n = 3/group). Control is shown in white, GFP in green, WT in yellow, and K11R in red. All quantified results are presented as mean ± SD; *P < 0.05, **P < 0.01, ***P < 0.001 by 1-way ANOVA.

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