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ASCL1 regulates and cooperates with FOXA2 to drive terminal neuroendocrine phenotype in prostate cancer
Shaghayegh Nouruzi, Takeshi Namekawa, Nakisa Tabrizian, Maxim Kobelev, Olena Sivak, Joshua M Scurll, Cassandra Jingjing Cui, Dwaipayan Ganguli, Amina Zoubeidi
Shaghayegh Nouruzi, Takeshi Namekawa, Nakisa Tabrizian, Maxim Kobelev, Olena Sivak, Joshua M Scurll, Cassandra Jingjing Cui, Dwaipayan Ganguli, Amina Zoubeidi
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Research Article Cell biology

ASCL1 regulates and cooperates with FOXA2 to drive terminal neuroendocrine phenotype in prostate cancer

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Abstract

Lineage plasticity mediates resistance to androgen receptor pathway inhibitors (ARPIs) and progression from adenocarcinoma to neuroendocrine prostate cancer (NEPC), a highly aggressive and poorly understood subtype. Neuronal transcription factor ASCL1 has emerged as a central regulator of the lineage plasticity driving neuroendocrine differentiation. Here, we showed that ASCL1 was reprogrammed in ARPI-induced transition to terminal NEPC and identified that the ASCL1 binding pattern tailored the expression of lineage-determinant transcription factor combinations that underlie discrete terminal NEPC identity. Notably, we identified FOXA2 as a major cofactor of ASCL1 in terminal NEPC, which is highly expressed in ASCL1-driven NEPC. Mechanistically, FOXA2 and ASCL1 interacted and worked in concert to orchestrate terminal neuronal differentiation. We identified that prospero homeobox 1 was a target of ASCL1 and FOXA2. Targeting prospero homeobox 1 abrogated neuroendocrine characteristics and led to a decrease in cell proliferation in vitro and tumor growth in vivo. Our findings provide insights into the molecular conduit underlying the interplay between different lineage-determinant transcription factors to support the neuroendocrine identity and nominate prospero homeobox 1 as a potential target in ASCL1-high NEPC.

Authors

Shaghayegh Nouruzi, Takeshi Namekawa, Nakisa Tabrizian, Maxim Kobelev, Olena Sivak, Joshua M Scurll, Cassandra Jingjing Cui, Dwaipayan Ganguli, Amina Zoubeidi

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Figure 2

FOXA2 in NEPC.

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FOXA2 in NEPC.
(A) Immunohistochemical staining for FOXA2 and SYP in CRP...
(A) Immunohistochemical staining for FOXA2 and SYP in CRPC and NEPC clinical samples. Original magnification, ×20. (B) Relative mRNA expression of neuronal and stem cell genes normalized to GAPDH in NCI-H660 following FOXA2 KD using shRNA (left) and 16DCRPC (CTL) following OE of FOXA2 (right). Data are reported relative to nontransfected cells (mean ± SD, n = 3 biologically independent samples). Statistical analysis was measured using a 2-tailed unpaired t test. Adeno, adenocarcinoma. (C) Heatmap of FOXA2 binding intensity as fold-change over input, with each horizontal line representing a 3 kb locus. (D) Motif enrichment analysis from FOXA2 ChIP-Seq in NEPC (top panel) and SCLC (bottom panel) shows the top 3 motifs, called using HOMER. (E) Genomic annotation of FOXA2 binding location in NEPC and SCLC cell models presented as the percentage of total peaks. (F) Venn diagram showing the overlap of FOXA2 target genes in NEPC and SCLC cell models (upper panel); pathways associated with FOXA2 shared target genes in NEPC and SCLC shown as negative log10 of P value, with P < 0.05 (lower panel). KEGG, Kyoto Encyclopedia of Genes and Genomes. (G) Using FOXA2 ChIP-Seq, the motifs enriched in NEPC and SCLC were compared. Motifs were ranked based on P value, with rank number 1 showing the most enriched. (H) Comparing the motifs enriched in FOXA2-bound open or closed chromatin. Motifs were ranked based on P value, with rank number 1 showing the most enriched.

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