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A dual-acting DNASE1/DNASE1L3 biologic prevents autoimmunity and death in genetic and induced lupus models
Paul R. Stabach, Dominique Sims, Eduardo Gomez-Bañuelos, Sandra Zehentmeier, Kris Dammen-Brower, Andrew Bernhisel, Sophia Kujawski, Sam G. Lopez, Michelle Petri, Daniel W. Goldman, Ethan R. Lester, Quan Le, Tayyaba Ishaq, Hana Kim, Shivani Srivastava, Deepika Kumar, Joao P. Pereira, Kevin J. Yarema, Fotios Koumpouras, Felipe Andrade, Demetrios T. Braddock
Paul R. Stabach, Dominique Sims, Eduardo Gomez-Bañuelos, Sandra Zehentmeier, Kris Dammen-Brower, Andrew Bernhisel, Sophia Kujawski, Sam G. Lopez, Michelle Petri, Daniel W. Goldman, Ethan R. Lester, Quan Le, Tayyaba Ishaq, Hana Kim, Shivani Srivastava, Deepika Kumar, Joao P. Pereira, Kevin J. Yarema, Fotios Koumpouras, Felipe Andrade, Demetrios T. Braddock
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Research Article Therapeutics

A dual-acting DNASE1/DNASE1L3 biologic prevents autoimmunity and death in genetic and induced lupus models

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Abstract

A defining feature of systemic lupus erythematosus (SLE) is loss of tolerance to self-DNA, and deficiency of DNASE1L3, the main enzyme responsible for chromatin degradation in blood, is also associated with SLE. This association can be found in an ultrarare population of pediatric patients with DNASE1L3 deficiency who develop SLE, adult patients with loss-of-function variants of DNASE1L3 who are at a higher risk for SLE, and patients with sporadic SLE who have neutralizing autoantibodies against DNASE1L3. To mitigate the pathogenic effects of inherited and acquired DNASE1L3 deficiencies, we engineered a long-acting enzyme biologic with dual DNASE1/DNASE1L3 activity that is resistant to DNASE1 and DNASE1L3 inhibitors. Notably, we found that the biologic prevented the development of lupus in Dnase1–/–Dnase1L3–/– double-knockout mice and rescued animals from death in pristane-induced lupus. Finally, we confirmed that the human isoform of the enzyme biologic was not recognized by autoantibodies in SLE and efficiently degraded genomic and mitochondrial cell–free DNA, as well as microparticle DNA, in SLE plasma. Our findings suggest that autoimmune diseases characterized by aberrant DNA accumulation, such as SLE, can be effectively treated with a replacement DNASE tailored to bypass pathogenic mechanisms, both genetic and acquired, that restrict DNASE1L3 activity.

Authors

Paul R. Stabach, Dominique Sims, Eduardo Gomez-Bañuelos, Sandra Zehentmeier, Kris Dammen-Brower, Andrew Bernhisel, Sophia Kujawski, Sam G. Lopez, Michelle Petri, Daniel W. Goldman, Ethan R. Lester, Quan Le, Tayyaba Ishaq, Hana Kim, Shivani Srivastava, Deepika Kumar, Joao P. Pereira, Kevin J. Yarema, Fotios Koumpouras, Felipe Andrade, Demetrios T. Braddock

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Figure 5

Survival and serum biomarkers of DKO mice following pristane challenged.

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Survival and serum biomarkers of DKO mice following pristane challenged....
(A) Following pristane challenge at 40 weeks, approximately 50% of vehicle-treated DKO mice died, whereas ≈85% of the DKO mice treated with LBme survived (P = 0.0103, Mantel-Cox). (B) Gross and (C) microscopic appearance of the lungs of surviving and dead animals. The lungs of the surviving animals could be classified in two groups — those that were grossly normal and those exhibiting fibrotic scarring indicative of earlier hemorrhagic events. H&E examination of pulmonary tissue from deceased mice shows alveolar wall thickening and inflammation. Scale bar: 200 μM. (D) Serum MPO, creatinine, and C3 levels at 40 weeks, and pulse oximetry levels in the pristane-treated lupus mice at 44 weeks (4 weeks following pristane treatment). *P < 0.05, **P < 0.01, ****P < 0.0001, ANOVA Kruskal-Wallis test. (E) Immunofluorescence from a lung section of an untreated mouse removed from the study due to severe DAH showing deposition of MPO (green arrows, left) and citrullinated histone H3 (Cit-H3) (red arrows, middle) in the alveolar walls and DAPI-stained nuclei in blue. Scale bar: 50 μM. Mice that died from DAH all revealed similar staining.

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