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E. coli catheter-associated urinary tract infections are associated with distinctive virulence and biofilm gene determinants
Zongsen Zou, … , Gautam Dantas, Jeffrey P. Henderson
Zongsen Zou, … , Gautam Dantas, Jeffrey P. Henderson
Published December 13, 2022
Citation Information: JCI Insight. 2023;8(2):e161461. https://doi.org/10.1172/jci.insight.161461.
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Research Article Infectious disease Microbiology

E. coli catheter-associated urinary tract infections are associated with distinctive virulence and biofilm gene determinants

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Abstract

Urinary catheterization facilitates urinary tract colonization by E. coli and increases infection risk. Here, we aimed to identify strain-specific characteristics associated with the transition from colonization to infection in catheterized patients. In a single-site study population, we compared E. coli isolates from patients with catheter-associated asymptomatic bacteriuria (CAASB) to those with catheter-associated urinary tract infection (CAUTI). CAUTI isolates were dominated by a phylotype B2 subclade containing the multidrug-resistant ST131 lineage relative to CAASB isolates, which were phylogenetically more diverse. A distinctive combination of virulence-associated genes was present in the CAUTI-associated B2 subclade. Catheter-associated biofilm formation was widespread among isolates and did not distinguish CAUTI from CAASB strains. Preincubation with CAASB strains could inhibit catheter colonization by multiple ST131 CAUTI isolates. Comparative genomic analysis identified a group of variable genes associated with high catheter biofilm formation present in both CAUTI and CAASB strains. Among these, ferric citrate transport (Fec) system genes were experimentally associated with enhanced catheter biofilm formation using reporter and fecA deletion strains. These results are consistent with a variable role for catheter biofilm formation in promoting CAUTI by ST131-like strains or resisting CAUTI by lower-risk strains that engage in niche exclusion.

Authors

Zongsen Zou, Robert F. Potter, William H. McCoy 4th, John A. Wildenthal, George L. Katumba, Peter J. Mucha, Gautam Dantas, Jeffrey P. Henderson

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Figure 5

Identification of catheter biofilm–associated genes.

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Identification of catheter biofilm–associated genes.
(A) Score plot of t...
(A) Score plot of the first 2 components from sparse partial least squares discriminant analysis (sPLSDA) for displaying group-wise clustering between high- and low-biofilm formers. (B) Component 1–associated top loadings from sPLSDA identified 72 biofilm-correlated genes, including 46 positive (high-biofilm) and 26 negative (low-biofilm) genes. (C) A force-directed network layout illustrated coassociations and 3 gene communities among 46 biofilm positively associated genes. Each node represented a gene. Each connecting line (edge) represented a positive association between 2 genes that satisfied the significance threshold (5% P value threshold, 1-tailed on the right, Fisher’s exact test). Edge lengths were determined by the level of correlation between connected genes. Nodes were colored by community assignment.

Copyright © 2023 American Society for Clinical Investigation
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