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A single-cell mass cytometry platform to map the effects of preclinical drugs on cartilage homeostasis
Neety Sahu, … , Fiorella Carla Grandi, Nidhi Bhutani
Neety Sahu, … , Fiorella Carla Grandi, Nidhi Bhutani
Published October 4, 2022
Citation Information: JCI Insight. 2022;7(20):e160702. https://doi.org/10.1172/jci.insight.160702.
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Research Article Cell biology Therapeutics

A single-cell mass cytometry platform to map the effects of preclinical drugs on cartilage homeostasis

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Abstract

No disease-modifying drug exists for osteoarthritis (OA). Despite success in animal models, candidate drugs continue to fail in clinical trials owing to the unmapped interpatient heterogeneity and disease complexity. We used a single-cell platform based on cytometry by time-of-flight (cyTOF) to precisely outline the effects of candidate drugs on human OA chondrocytes. OA chondrocytes harvested from patients undergoing total knee arthroplasty were treated with 2 drugs, an NF-κB pathway inhibitor, BMS-345541, and a chondroinductive small molecule, kartogenin, that showed preclinical success in animal models for OA. cyTOF conducted with 30 metal isotope–labeled antibodies parsed the effects of the drugs on inflammatory, senescent, and chondroprogenitor cell populations. The NF-κB pathway inhibition decreased the expression of p–NF-κB, HIF2A, and inducible NOS in multiple chondrocyte clusters and significantly depleted 4 p16ink4a-expressing senescent populations, including NOTCH1+STRO1+ chondroprogenitor cells. While kartogenin also affected select p16ink4a-expressing senescent clusters, there was a less discernible effect on chondroprogenitor cell populations. Overall, BMS-345541 elicited a uniform drug response in all patients, while only a few responded to kartogenin. These studies demonstrate that a single-cell cyTOF-based drug screening platform can provide insights into patient response assessment and patient stratification.

Authors

Neety Sahu, Fiorella Carla Grandi, Nidhi Bhutani

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Figure 5

Effect of kartogenin treatment on the OA chondrocyte landscape.

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Effect of kartogenin treatment on the OA chondrocyte landscape.
(A) UMAP...
(A) UMAP of differentially abundant clusters in the combined control and kartogenin-treated samples (n = 6 per treatment, concatenated). (B) Percentage abundance of significantly different clusters in paired samples with control or kartogenin treatment. Statistical significance was calculated by paired t test at 95% confidence level and represented by adjusted P values. (C) UMAP of p16ink4a-expressing clusters in control and kartogenin samples. Dashed line encircling SnC I cluster represents significant depletion following kartogenin treatment. (D) UMAP of the median expression of p16ink4a in the combined control and kartogenin-treated samples (n = 6 samples concatenated). (E) Mean expression of RUNX1 and RUNX2 in paired samples (n = 6) with control or kartogenin treatment. Statistical significance was calculated by paired t test at 95% confidence level and represented by adjusted P values. (F) UMAP illustrating Inf-A, Inf-D, and Snc CPC III clusters in control and kartogenin-treated groups (n = 6 samples concatenated).

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