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Mitochondrial dysfunction–induced H3K27 hyperacetylation perturbs enhancers in Parkinson’s disease
Minhong Huang, Dan Lou, Adhithiya Charli, Dehui Kong, Huajun Jin, Gary Zenitsky, Vellareddy Anantharam, Arthi Kanthasamy, Zhibin Wang, Anumantha G. Kanthasamy
Minhong Huang, Dan Lou, Adhithiya Charli, Dehui Kong, Huajun Jin, Gary Zenitsky, Vellareddy Anantharam, Arthi Kanthasamy, Zhibin Wang, Anumantha G. Kanthasamy
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Research Article Neuroscience

Mitochondrial dysfunction–induced H3K27 hyperacetylation perturbs enhancers in Parkinson’s disease

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Abstract

Mitochondrial dysfunction is a major pathophysiological contributor to the progression of Parkinson’s disease (PD); however, whether it contributes to epigenetic dysregulation remains unknown. Here, we show that both chemically and genetically driven mitochondrial dysfunctions share a common mechanism of epigenetic dysregulation. Under both scenarios, lysine 27 acetylation of likely variant H3.3 (H3.3K27ac) increased in dopaminergic neuronal models of PD, thereby opening that region to active enhancer activity via H3K27ac. These vulnerable epigenomic loci represent potential transcription factor motifs for PD pathogenesis. We further confirmed that mitochondrial dysfunction induces H3K27ac in ex vivo and in vivo (MitoPark) neurodegenerative models of PD. Notably, the significantly increased H3K27ac in postmortem PD brains highlights the clinical relevance to the human PD population. Our results reveal an exciting mitochondrial dysfunction-metabolism-H3K27ac-transcriptome axis for PD pathogenesis. Collectively, the mechanistic insights link mitochondrial dysfunction to epigenetic dysregulation in dopaminergic degeneration and offer potential new epigenetic intervention strategies for PD.

Authors

Minhong Huang, Dan Lou, Adhithiya Charli, Dehui Kong, Huajun Jin, Gary Zenitsky, Vellareddy Anantharam, Arthi Kanthasamy, Zhibin Wang, Anumantha G. Kanthasamy

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Figure 7

Elevated H3K27ac in substantia nigra of MitoPark mice.

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Elevated H3K27ac in substantia nigra of MitoPark mice.
(A) Representativ...
(A) Representative immunoblots and (B) their quantification from MitoPark (MP) and littermate control (LC) mice. Mann-Whitney test (n = 4). (C) Zoomed-in images (scale bar: 5 μm) of 7-μm-thick paraffin-embedded sections (shown in Supplemental Figure 6G) with H3K27ac in red, nucleus in blue, and TH in green. MP1 shows not only colocalization of TH and H3K27ac but also several degrading TH neurons, whereas MP2 reveals degraded TH neurons and minimal colocalization. Arrows denote colocalization of H3K27ac and TH. (D) Confocal images of 30-μm free-floating sections from same-aged mice with H3K27ac in green and nucleus in blue. Scale bar: 5 μm. (E) 3D surface plot analysis for H3K27ac. (F) Images stitched together from 150 images (original magnification, ×60) showing the entire region of the substantia nigra (SN) (H3K27ac, green; nucleus, blue). Arrows denote H3K27ac. Scale bar: 400 μm. (G) Quantified fluorescence intensity for H3K27ac. (H) Count of cells stained with H3K27ac. (I) Area of SN with cells stained with H3K27ac. Each data point is the average of 3 replicates. For IHC of substantia nigra, n = 11–12. Independent experiments were repeated 4 times. Bar graphs show mean ± SEM; unpaired 2-tailed Student’s t test. NS, not significant. **P < 0.01.

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