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Loss of Sbds in zebrafish leads to neutropenia and pancreas and liver atrophy
Usua Oyarbide, Arish N. Shah, Wilmer Amaya-Mejia, Matthew Snyderman, Margaret J. Kell, Daniela S. Allende, Eliezer Calo, Jacek Topczewski, Seth J. Corey
Usua Oyarbide, Arish N. Shah, Wilmer Amaya-Mejia, Matthew Snyderman, Margaret J. Kell, Daniela S. Allende, Eliezer Calo, Jacek Topczewski, Seth J. Corey
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Research Article Gastroenterology Hematology

Loss of Sbds in zebrafish leads to neutropenia and pancreas and liver atrophy

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Abstract

Shwachman-Diamond syndrome (SDS) is characterized by exocrine pancreatic insufficiency, neutropenia, and skeletal abnormalities. Biallelic mutations in SBDS, which encodes a ribosome maturation factor, are found in 90% of SDS cases. Sbds–/– mice are embryonic lethal. Using CRISPR/Cas9 editing, we created sbds-deficient zebrafish strains. Sbds protein levels progressively decreased and became undetectable at 10 days postfertilization (dpf). Polysome analysis revealed decreased 80S ribosomes. Homozygous mutant fish developed normally until 15 dpf. Mutant fish subsequently had stunted growth and showed signs of atrophy in pancreas, liver, and intestine. In addition, neutropenia occurred by 5 dpf. Upregulation of tp53 mRNA did not occur until 10 dpf, and inhibition of proliferation correlated with death by 21 dpf. Transcriptome analysis showed tp53 activation through upregulation of genes involved in cell cycle arrest, cdkn1a and ccng1, and apoptosis, puma and mdm2. However, elimination of Tp53 function did not prevent lethality. Because of growth retardation and atrophy of intestinal epithelia, we studied the effects of starvation on WT fish. Starved WT fish showed intestinal atrophy, zymogen granule loss, and tp53 upregulation — similar to the mutant phenotype. In addition, there was reduction in neutral lipid storage and ribosomal protein amount, similar to the mutant phenotype. Thus, loss of Sbds in zebrafish phenocopies much of the human disease and is associated with growth arrest and tissue atrophy, particularly of the gastrointestinal system, at the larval stage. A variety of stress responses, some associated with Tp53, contribute to pathophysiology of SDS.

Authors

Usua Oyarbide, Arish N. Shah, Wilmer Amaya-Mejia, Matthew Snyderman, Margaret J. Kell, Daniela S. Allende, Eliezer Calo, Jacek Topczewski, Seth J. Corey

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Figure 2

Sbds mutation leads to a defect in growth and fin regeneration and neutropenia.

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Sbds mutation leads to a defect in growth and fin regeneration and neutr...
(A) Survival rates for siblings of sbdsnu132. (B) Rescue of sbds mutants: Western blot showing Sbds from fins of adult fish with the indicated different genotypes. Note that the transgenic line expresses Sbds of a slightly bigger mass, due to an inadvertently introduced initiation codon upstream of the coding sequence. We took advantage of this 23–amino acid tag to distinguish between endogenous and exogenously introduced Sbds. Actin is shown as a control for protein loading. (C) Survival analysis, which demonstrates the rescue of sbdsnu132/nu132 by the transgenic line Tg(ubiloxP:sbdsloxP:GFP) N = 50; sbdsnu132/nu132. (D) Images of 10, 15, and 21 dpf larvae from the same clutch: sbds+/+ and sbdsnu132/nu132. Scale bars: 200 μm (10 dpf), 500 μm (15 dpf), 1000 μm (sbds+/+ 21 dpf), and 500 μm (sbdsnu132/nu132 21 dpf). (E) Size variability of mutants (sbdsnu132 and sbdsnu167) in the first 21 dpf. Fin regeneration 48 hours after amputation (hpa) in fish that are (F) 15 dpf (N = 30) and (G) 21 dpf, which shows less regeneration (N = 42). (H) Representative images of the fins 48 hpa in 21 dpf larvae for sbds+/+ and sbdsnu132/nu132. The sbdsnu132/nu132 mutants possess a decreased number of neutrophils. Original magnification, ×6.3. (I) Presence of neutrophils at 15 dpf in sbds+/+ and sbdsnu132/nu132 using the Tg(mpx:Dendra2)uw4. Original magnification, ×20. Number of neutrophils (J) at 5 and (K) at 15 dpf; N = 59 and N = 96, respectively. ANOVA test. *P < 0.05, **P < 0.001, ***P < 0.0001.

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