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YAP1 oncogene is a context-specific driver for pancreatic ductal adenocarcinoma
Bo Tu, Jun Yao, Sammy Ferri-Borgogno, Jun Zhao, Shujuan Chen, Qiuyun Wang, Liang Yan, Xin Zhou, Cihui Zhu, Seungmin Bang, Qing Chang, Christopher A. Bristow, Ya’an Kang, Hongwu Zheng, Huamin Wang, Jason B. Fleming, Michael Kim, Timothy P. Heffernan, Giulio F. Draetta, Duojia Pan, Anirban Maitra, Wantong Yao, Sonal Gupta, Haoqiang Ying
Bo Tu, Jun Yao, Sammy Ferri-Borgogno, Jun Zhao, Shujuan Chen, Qiuyun Wang, Liang Yan, Xin Zhou, Cihui Zhu, Seungmin Bang, Qing Chang, Christopher A. Bristow, Ya’an Kang, Hongwu Zheng, Huamin Wang, Jason B. Fleming, Michael Kim, Timothy P. Heffernan, Giulio F. Draetta, Duojia Pan, Anirban Maitra, Wantong Yao, Sonal Gupta, Haoqiang Ying
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Research Article Genetics Oncology

YAP1 oncogene is a context-specific driver for pancreatic ductal adenocarcinoma

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Abstract

Transcriptomic profiling classifies pancreatic ductal adenocarcinoma (PDAC) into several molecular subtypes with distinctive histological and clinical characteristics. However, little is known about the molecular mechanisms that define each subtype and their correlation with clinical outcome. Mutant KRAS is the most prominent driver in PDAC, present in over 90% of tumors, but the dependence of tumors on oncogenic KRAS signaling varies between subtypes. In particular, the squamous subtype is relatively independent of oncogenic KRAS signaling and typically displays much more aggressive clinical behavior versus the progenitor subtype. Here, we identified that yes-associated protein 1 (YAP1) activation is enriched in the squamous subtype and associated with poor prognosis. Activation of YAP1 in progenitor subtype cancer cells profoundly enhanced malignant phenotypes and transformed progenitor subtype cells into squamous subtype. Conversely, depletion of YAP1 specifically suppressed tumorigenicity of squamous subtype PDAC cells. Mechanistically, we uncovered a significant positive correlation between WNT5A expression and YAP1 activity in human PDAC and demonstrated that WNT5A overexpression led to YAP1 activation and recapitulated a YAP1-dependent but Kras-independent phenotype of tumor progression and maintenance. Thus, our study identifies YAP1 oncogene as a major driver of squamous subtype PDAC and uncovers the role of WNT5A in driving PDAC malignancy through activation of the YAP pathway.

Authors

Bo Tu, Jun Yao, Sammy Ferri-Borgogno, Jun Zhao, Shujuan Chen, Qiuyun Wang, Liang Yan, Xin Zhou, Cihui Zhu, Seungmin Bang, Qing Chang, Christopher A. Bristow, Ya’an Kang, Hongwu Zheng, Huamin Wang, Jason B. Fleming, Michael Kim, Timothy P. Heffernan, Giulio F. Draetta, Duojia Pan, Anirban Maitra, Wantong Yao, Sonal Gupta, Haoqiang Ying

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Figure 5

WNT5A overexpression leads to the bypass of KRAS dependency.

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WNT5A overexpression leads to the bypass of KRAS dependency.
(A) Cell gr...
(A) Cell growth assay for PaTu8988S-GFP or -WNT5A cells infected with KRAS shRNAs or nontargeting control shRNA. Quantification from triplicates is presented as relative cell growth upon normalization to control group. Error bars indicate ± SD of triplicates; **P < 0.01. (B) Western blot analysis for WNT5A and YAP1 in AK192 (iKras+) cells expressing GFP or WNT5A upon knockdown of YAP1 with shRNA. (C) Mouse AK192-GFP or AK192-WNT5A cells infected with nontargeting shRNA (shCtr) or YAP1 shRNA (shYap1) were grown as 3D tumor spheres in the presence or absence of doxycycline for 4 days. Cellular apoptosis was measured with annexin V staining. Representative images of 2 independent experiments show the FACS analysis of annexin V and 7-AAD staining. Numbers represent the percentage of early apoptosis (annexin V+ 7-AAD–) and late apoptosis (annexin V+ 7-AAD+) populations. (D) Quantification of total apoptotic cell from C (2 independent experiments). Doxycycline withdrawal leads to dramatic apoptosis of AK192-GFP tumor sphere. Such apoptosis induced by doxycycline withdrawal was significantly inhibited in WNT5A-expressing cells, which was partially reversed upon YAP1 knockdown. The box plots depict the minimum and maximum values (whiskers), the upper and lower quartiles, and the median. The length of the box represents the interquartile range.

Copyright © 2026 American Society for Clinical Investigation
ISSN 2379-3708

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