Go to The Journal of Clinical Investigation
  • About
  • Editors
  • Consulting Editors
  • For authors
  • Publication ethics
  • Transfers
  • Advertising
  • Job board
  • Contact
  • Current issue
  • Past issues
  • By specialty
    • COVID-19
    • Cardiology
    • Immunology
    • Metabolism
    • Nephrology
    • Oncology
    • Pulmonology
    • All ...
  • Videos
  • Collections
    • Resource and Technical Advances
    • Clinical Medicine
    • Reviews
    • Editorials
    • Perspectives
    • Top read articles
  • JCI This Month
    • Current issue
    • Past issues

  • Current issue
  • Past issues
  • Specialties
  • In-Press Preview
  • Editorials
  • Viewpoint
  • Top read articles
  • About
  • Editors
  • Consulting Editors
  • For authors
  • Publication ethics
  • Transfers
  • Advertising
  • Job board
  • Contact
Precocious neuronal differentiation and disrupted oxygen responses in Kabuki syndrome
Giovanni A. Carosso, … , Loyal A. Goff, Hans T. Bjornsson
Giovanni A. Carosso, … , Loyal A. Goff, Hans T. Bjornsson
Published August 29, 2019
Citation Information: JCI Insight. 2019;4(20):e129375. https://doi.org/10.1172/jci.insight.129375.
View: Text | PDF
Research Article Genetics Neuroscience

Precocious neuronal differentiation and disrupted oxygen responses in Kabuki syndrome

  • Text
  • PDF
Abstract

Chromatin modifiers act to coordinate gene expression changes critical to neuronal differentiation from neural stem/progenitor cells (NSPCs). Lysine-specific methyltransferase 2D (KMT2D) encodes a histone methyltransferase that promotes transcriptional activation and is frequently mutated in cancers and in the majority (>70%) of patients diagnosed with the congenital, multisystem intellectual disability disorder Kabuki syndrome 1 (KS1). Critical roles for KMT2D are established in various non-neural tissues, but the effects of KMT2D loss in brain cell development have not been described. We conducted parallel studies of proliferation, differentiation, transcription, and chromatin profiling in KMT2D-deficient human and mouse models to define KMT2D-regulated functions in neurodevelopmental contexts, including adult-born hippocampal NSPCs in vivo and in vitro. We report cell-autonomous defects in proliferation, cell cycle, and survival, accompanied by early NSPC maturation in several KMT2D-deficient model systems. Transcriptional suppression in KMT2D-deficient cells indicated strong perturbation of hypoxia-responsive metabolism pathways. Functional experiments confirmed abnormalities of cellular hypoxia responses in KMT2D-deficient neural cells and accelerated NSPC maturation in vivo. Together, our findings support a model in which loss of KMT2D function suppresses expression of oxygen-responsive gene programs important to neural progenitor maintenance, resulting in precocious neuronal differentiation in a mouse model of KS1.

Authors

Giovanni A. Carosso, Leandros Boukas, Jonathan J. Augustin, Ha Nam Nguyen, Briana L. Winer, Gabrielle H. Cannon, Johanna D. Robertson, Li Zhang, Kasper D. Hansen, Loyal A. Goff, Hans T. Bjornsson

×

Figure 2

Suppressed transcription of KMT2D-regulated hypoxia response genes upon loss of the Kmt2d SET methyltransferase domain in neuronal cells.

Options: View larger image (or click on image) Download as PowerPoint
Suppressed transcription of KMT2D-regulated hypoxia response genes upon ...
(A) Expression analysis by RNA-Seq in HT22 cells revealed 575 significant differentially expressed genes (DEGs) in Kmt2dΔ/Δ clones (3 biological replicates) relative to Kmt2d+/+ cells, each in technical triplicate. Fold changes in expression indicate the most significant Kmt2dΔ/Δ DEGs (~76%, red dots) are downregulated in Kmt2dΔ/Δ cells, plotted against P value and mean expression. (B) Gene networks significantly enriched among down- or upregulated Kmt2dΔ/Δ DEGs. (C) Kmt2dΔ/Δ DEGs that are also KMT2D bound, as determined by ChIP-Seq chromatin profiling in Kmt2d+/+ HT22 cells, and gene networks significantly enriched among KMT2D-bound, Kmt2dΔ/Δ DEGs. (D) Representative ChIP-Seq track of a KMT2D-bound, Kmt2dΔ/Δ DEG depicting KMT2D binding peaks (shown in black), RefSeq gene annotations (shown in blue), and CpG islands (shown in green). (E) Overlapping loci of observed KMT2D-ChIP peaks in HT22 cells and HIF1A-ChIP peaks in embryonic hearts (26). Overlapping KMT2D/HIF1A peak regions, compared with individually bound regions, are enriched at gene promoters. (F) Reverse transcription quantitative PCR (RT-qPCR) analysis of hypoxia-induced gene expression in Kmt2d+/+, Kmt2d+/Δ, and Kmt2dΔ/Δ cells, following 72 hours in normoxia (21% O2) or hypoxia (1% O2), with fold induction of target gene mRNA. Two biological replicates per genotype, each in technical triplicate. One-way ANOVA (*P < 0.05, **P < 0.01, and ***P < 0.001). Fisher’s exact test (†FDR < 0.05, ††FDR < 0.01, and †††FDR < 0.001).

Copyright © 2023 American Society for Clinical Investigation
ISSN 2379-3708

Sign up for email alerts