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Coupling AAV-mediated promoterless gene targeting to SaCas9 nuclease to efficiently correct liver metabolic diseases
Alessia De Caneva, … , Lorena Zentilin, Andrés F. Muro
Alessia De Caneva, … , Lorena Zentilin, Andrés F. Muro
Published June 18, 2019
Citation Information: JCI Insight. 2019;4(15):e128863. https://doi.org/10.1172/jci.insight.128863.
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Research Article Genetics Hepatology

Coupling AAV-mediated promoterless gene targeting to SaCas9 nuclease to efficiently correct liver metabolic diseases

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Abstract

Nonintegrative AAV-mediated gene therapy in the liver is effective in adult patients but faces limitations in pediatric settings because of episomal DNA loss during hepatocyte proliferation. Gene targeting is a promising approach as it results in the permanent modification of the genome. We previously rescued neonatal lethality in Crigler-Najjar mice by inserting a promoterless human uridine glucuronosyl transferase A1 (UGT1A1) cDNA in exon 14 of the albumin gene, without the use of nucleases. To increase the recombination rate and therapeutic efficacy, we used CRISPR/SaCas9. Neonatal mice were transduced with 2 AAVs: one expressing the SaCas9 and sgRNA and one containing a promoterless cDNA flanked by albumin homology regions. Targeting efficiency increased approximately 26-fold with an EGFP reporter cDNA, reaching up to 24% of EGFP-positive hepatocytes. Next, we fully corrected the diseased phenotype of Crigler-Najjar mice by targeting the hUGT1A1 cDNA. Treated mice had normal plasma bilirubin up to 10 months after administration, hUGT1A1 protein levels were approximately 6-fold higher than in WT liver, with a 90-fold increase in recombination rate. Liver histology, inflammatory markers, and plasma albumin were normal in treated mice, with no off-targets in predicted sites. Thus, the improved efficacy and reassuring safety profile support the potential application of the proposed approach to other liver diseases.

Authors

Alessia De Caneva, Fabiola Porro, Giulia Bortolussi, Riccardo Sola, Michela Lisjak, Adi Barzel, Mauro Giacca, Mark A. Kay, Kristian Vlahoviček, Lorena Zentilin, Andrés F. Muro

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Figure 2

The sgRNA8 is the most active sgRNA in targeting the endogenous albumin locus.

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The sgRNA8 is the most active sgRNA in targeting the endogenous albumin ...
(A) In vitro experimental scheme. NIH-3T3 mouse fibroblasts were transfected with the pX601-SaCas9 vectors and collected at day 8, after the addition of G418 (day 3). Genomic DNA was extracted, the target region PCR amplified, and the T7E1 assay and sequencing analysis were performed. (B) The expected bands of T7E1 assay were observed for both sgRNA7 and sgRNA8 transfected cells. T7E1 + or –, treated or not with the T7E1 endonuclease. The size of the fragments is indicated. Right panel: F and R, forward and reverse primers used in the PCR amplifications. The uncut gels are provided in Supplemental Figures 15 and 16. (C) In vivo experimental scheme. WT newborn mice were i.p. transduced at P4 with rAAV8-SaCas9-sgRNA7 or rAAV8-SaCas9-sgRNA8 (1.0E12 vg/mouse) and the liver was collected at P19. Genomic DNA was extracted, the target region PCR amplified, and the T7E1 assay and NGS sequencing were performed. IP, i.p. (D) The T7E1 results for the sgRNA7 and sgRNA8 T7E1 assays are shown. The INDEL % is indicated. Three mice/sgRNA were treated and analyzed; ctrl + cells, cells treated with the corresponding pX601-SaCas9 vector, ctrl-mouse, untransduced mice. The uncut gels are provided in Supplemental Figures 15 and 16.

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