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Distinct amino acid and lipid perturbations characterize acute versus chronic malaria
Regina Joice Cordy, Rapatbhorn Patrapuvich, Loukia N. Lili, Monica Cabrera-Mora, Jung-Ting Chien, Gregory K. Tharp, Manoj Khadka, Esmeralda V.S. Meyer, Stacey A. Lapp, Chester J. Joyner, AnaPatricia Garcia, Sophia Banton, ViLinh Tran, Viravarn Luvira, Siriwan Rungin, Teerawat Saeseu, Nattawan Rachaphaew, Suman B. Pakala, Jeremy D. DeBarry, MaHPIC Consortium, Jessica C. Kissinger, Eric A. Ortlund, Steven E. Bosinger, John W. Barnwell, Dean P. Jones, Karan Uppal, Shuzhao Li, Jetsumon Sattabongkot, Alberto Moreno, Mary R. Galinski
Regina Joice Cordy, Rapatbhorn Patrapuvich, Loukia N. Lili, Monica Cabrera-Mora, Jung-Ting Chien, Gregory K. Tharp, Manoj Khadka, Esmeralda V.S. Meyer, Stacey A. Lapp, Chester J. Joyner, AnaPatricia Garcia, Sophia Banton, ViLinh Tran, Viravarn Luvira, Siriwan Rungin, Teerawat Saeseu, Nattawan Rachaphaew, Suman B. Pakala, Jeremy D. DeBarry, MaHPIC Consortium, Jessica C. Kissinger, Eric A. Ortlund, Steven E. Bosinger, John W. Barnwell, Dean P. Jones, Karan Uppal, Shuzhao Li, Jetsumon Sattabongkot, Alberto Moreno, Mary R. Galinski
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Research Article Infectious disease Microbiology

Distinct amino acid and lipid perturbations characterize acute versus chronic malaria

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Abstract

Chronic malaria is a major public health problem and significant challenge for disease eradication efforts. Despite its importance, the biological factors underpinning chronic malaria are not fully understood. Recent studies have shown that host metabolic state can influence malaria pathogenesis and transmission, but its role in chronicity is not known. Here, with the goal of identifying distinct modifications in the metabolite profiles of acute versus chronic malaria, metabolomics was performed on plasma from Plasmodium-infected humans and nonhuman primates with a range of parasitemias and clinical signs. In rhesus macaques infected with Plasmodium coatneyi, significant alterations in amines, carnitines, and lipids were detected during a high parasitemic acute phase and many of these reverted to baseline levels once a low parasitemic chronic phase was established. Plasmodium gene expression, studied in parallel in the macaques, revealed transcriptional changes in amine, fatty acid, lipid and energy metabolism genes, as well as variant antigen genes. Furthermore, a common set of amines, carnitines, and lipids distinguished acute from chronic malaria in plasma from human Plasmodium falciparum cases. In summary, distinct host-parasite metabolic environments have been uncovered that characterize acute versus chronic malaria, providing insights into the underlying host-parasite biology of malaria disease progression.

Authors

Regina Joice Cordy, Rapatbhorn Patrapuvich, Loukia N. Lili, Monica Cabrera-Mora, Jung-Ting Chien, Gregory K. Tharp, Manoj Khadka, Esmeralda V.S. Meyer, Stacey A. Lapp, Chester J. Joyner, AnaPatricia Garcia, Sophia Banton, ViLinh Tran, Viravarn Luvira, Siriwan Rungin, Teerawat Saeseu, Nattawan Rachaphaew, Suman B. Pakala, Jeremy D. DeBarry, MaHPIC Consortium, Jessica C. Kissinger, Eric A. Ortlund, Steven E. Bosinger, John W. Barnwell, Dean P. Jones, Karan Uppal, Shuzhao Li, Jetsumon Sattabongkot, Alberto Moreno, Mary R. Galinski

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Figure 6

Changes in expression of variant antigens and amino acid, fatty acid, lipid, energy, and terpenoid metabolism detected in the parasite transcriptome during acute versus chronic phases in rhesus macaques.

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Changes in expression of variant antigens and amino acid, fatty acid, li...
(A) Venn diagram of the 961 parasite genes differentially expressed across clinical phases, with colors representing different comparisons, acute versus chronic (yellow), post-subRx versus chronic (blue), and acute versus post-subRx (purple). (B) Clusters of SICAvar or SICAvar-like genes having high expression at the post-subRx and chronic phases (i) and at the acute and post-subRx phases (ii) are indicated in the form of HCA plots with manual clustering along the x axis (columns are grouped by clinical phase and are always in the same order of animals: RWr13, RUn13, and RTi13). (C) Metabolic pathways significantly enriched in the 961 differentially expressed genes (metabolic pathway enrichment using MetaCyc, P < 0.05). The number of genes in the data set and in the pathway are shown. (D–G) HCA plots of parasite gene subsets with manual clustering along the x axis (with columns in the same order as in C). Gene subsets include 36 genes from the significantly enriched MetaCyc pathways, grouped into the following subcategories: (D) amino acid, amine, and polyamine biosynthesis; (E) fatty acid and lipid metabolism; (F) energy metabolism; and (G) terpenoid metabolism.

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