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Functional correction of dystrophin actin binding domain mutations by genome editing
Viktoriia Kyrychenko, Sergii Kyrychenko, Malte Tiburcy, John M. Shelton, Chengzu Long, Jay W. Schneider, Wolfram-Hubertus Zimmermann, Rhonda Bassel-Duby, Eric N. Olson
Viktoriia Kyrychenko, Sergii Kyrychenko, Malte Tiburcy, John M. Shelton, Chengzu Long, Jay W. Schneider, Wolfram-Hubertus Zimmermann, Rhonda Bassel-Duby, Eric N. Olson
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Research Article Muscle biology

Functional correction of dystrophin actin binding domain mutations by genome editing

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Abstract

Dystrophin maintains the integrity of striated muscles by linking the actin cytoskeleton with the cell membrane. Duchenne muscular dystrophy (DMD) is caused by mutations in the dystrophin gene (DMD) that result in progressive, debilitating muscle weakness, cardiomyopathy, and a shortened lifespan. Mutations of dystrophin that disrupt the amino-terminal actin-binding domain 1 (ABD-1), encoded by exons 2–8, represent the second-most common cause of DMD. In the present study, we compared three different strategies for CRISPR/Cas9 genome editing to correct mutations in the ABD-1 region of the DMD gene by deleting exons 3–9, 6–9, or 7–11 in human induced pluripotent stem cells (iPSCs) and by assessing the function of iPSC-derived cardiomyocytes. All three exon deletion strategies enabled the expression of truncated dystrophin protein and restoration of cardiomyocyte contractility and calcium transients to varying degrees. We show that deletion of exons 3–9 by genomic editing provides an especially effective means of correcting disease-causing ABD-1 mutations. These findings represent an important step toward eventual correction of common DMD mutations and provide a means of rapidly assessing the expression and function of internally truncated forms of dystrophin-lacking portions of ABD-1.

Authors

Viktoriia Kyrychenko, Sergii Kyrychenko, Malte Tiburcy, John M. Shelton, Chengzu Long, Jay W. Schneider, Wolfram-Hubertus Zimmermann, Rhonda Bassel-Duby, Eric N. Olson

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Figure 5

Functional analysis of iPSC-derived cardiomyocytes.

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Functional analysis of iPSC-derived cardiomyocytes.
(A) Representative r...
(A) Representative recordings of spontaneous Ca2+ activity of induced pluripotent cell–derived (iPSC-derived) cardiomyocytes loaded with Ca2+ indicator Fluo-4AM. Traces show change in fluorescence intensity (F) in relationship to resting fluorescence intensity (Fo). (B) Relative time to peak (TTP), (C) decay (τ), and (D) transient duration (TD), as measured by calcium imaging. (E) Arrhythmic iPSC–derived cardiomyocytes were identified based on calcium activity. For all corrected iPSC-derived cardiomyocyte lines (B–E), data were obtained from 2 independent clones. n = 113 for control; n = 105 for ΔEx8-9 iDMD; n = 129 for ΔEx3-9; n = 121 for ΔEx6-9; and n = 122 for ΔEx7-11 iPSC–derived cardiomyocyte lines from 5–11 independent experiments. Data are represented as mean ± SEM. *P < 0.05 by one-way ANOVA. (F) Force of contraction (FOC) recorded in EHM under isometric conditions in the presence of increasing extracellular Ca2+. EHM generated from 2 independent control lines (n = 8), ΔEx8-9 iDMD (n = 6), ΔEx3-9 (n = 14), ΔEx6-9 (n = 3), and ΔEx7-11 (n = 3). *P < 0.05 by two-way ANOVA and Tukey’s post-hoc test. (G) Representative recordings of EHM contractions from the indicated groups (same EHM as in F). Data are represented as mean ± SEM.

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