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Broadly neutralizing antibodies with few somatic mutations and hepatitis C virus clearance
Justin R. Bailey, … , Stuart C. Ray, James E. Crowe Jr.
Justin R. Bailey, … , Stuart C. Ray, James E. Crowe Jr.
Published May 4, 2017
Citation Information: JCI Insight. 2017;2(9):e92872. https://doi.org/10.1172/jci.insight.92872.
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Research Article Infectious disease

Broadly neutralizing antibodies with few somatic mutations and hepatitis C virus clearance

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Abstract

Here, we report the isolation of broadly neutralizing mAbs (bNAbs) from persons with broadly neutralizing serum who spontaneously cleared hepatitis C virus (HCV) infection. We found that bNAbs from two donors bound the same epitope and were encoded by the same germline heavy chain variable gene segment. Remarkably, these bNAbs were encoded by antibody variable genes with sparse somatic mutations. For one of the most potent bNAbs, these somatic mutations were critical for antibody neutralizing breadth and for binding to autologous envelope variants circulating late in infection. However, somatic mutations were not necessary for binding of the bNAb unmutated ancestor to envelope proteins of early autologous transmitted/founder viruses. This study identifies a public B cell clonotype favoring early recognition of a conserved HCV epitope, proving that anti-HCV bNAbs can achieve substantial neutralizing breadth with relatively few somatic mutations, and identifies HCV envelope variants that favored selection and maturation of an anti-HCV bNAb in vivo. These data provide insight into the molecular mechanisms of immune-mediated clearance of HCV infection and present a roadmap to guide development of a vaccine capable of stimulating anti-HCV bNAbs with a physiologic number of somatic mutations characteristic of vaccine responses.

Authors

Justin R. Bailey, Andrew I. Flyak, Valerie J. Cohen, Hui Li, Lisa N. Wasilewski, Anna E. Snider, Shuyi Wang, Gerald H. Learn, Nurgun Kose, Leah Loerinc, Rebecca Lampley, Andrea L. Cox, Jennifer M. Pfaff, Benjamin J. Doranz, George M. Shaw, Stuart C. Ray, James E. Crowe Jr.

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Figure 1

Identification of subjects who spontaneously cleared HCV and possess broadly neutralizing antibodies in plasma.

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Identification of subjects who spontaneously cleared HCV and possess bro...
(A) HCV viral loads of two subjects who spontaneously cleared HCV infection sampled periodically from the time of initial infection through viral clearance. The dashed line indicates limit of detection (LOD) of the viral load assay, which is 50 IU/ml. Values below the LOD are set at 25 IU/ml and marked with gray circles. Plasma samples that were HCV antibody negative or positive by commercial antibody-binding assay (EIA) are indicated by - and +, respectively. The green triangles represent plasma samples tested for neutralizing breadth against the panel of 19 genotype 1 HCV pseudoparticle (HCVpp). The yellow triangles represent time points from which anti-HCV mAbs were isolated. The blue triangles represent plasma samples from which the viral quasispecies was sequenced by single-genome amplification. (B) Neutralizing breadth of plasma from the two subjects tested against a diverse panel of genotype 1a or 1b HCVpp. Values shown are the percentage of neutralization achieved by a 1:100 dilution of plasma, tested in duplicate. *For comparison, the median neutralization of each HCVpp from 42 subjects with persistent HCV infection, matched with subjects who cleared for duration of infection (Control plasma), is also shown.

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ISSN 2379-3708

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