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Nicotinamide metabolism regulates glioblastoma stem cell maintenance
Jinkyu Jung, Leo J.Y. Kim, Xiuxing Wang, Qiulian Wu, Tanwarat Sanvoranart, Christopher G. Hubert, Briana C. Prager, Lisa C. Wallace, Xun Jin, Stephen C. Mack, Jeremy N. Rich
Jinkyu Jung, Leo J.Y. Kim, Xiuxing Wang, Qiulian Wu, Tanwarat Sanvoranart, Christopher G. Hubert, Briana C. Prager, Lisa C. Wallace, Xun Jin, Stephen C. Mack, Jeremy N. Rich
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Research Article Oncology Stem cells

Nicotinamide metabolism regulates glioblastoma stem cell maintenance

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Abstract

Metabolic dysregulation promotes cancer growth through not only energy production, but also epigenetic reprogramming. Here, we report that a critical node in methyl donor metabolism, nicotinamide N-methyltransferase (NNMT), ranked among the most consistently overexpressed metabolism genes in glioblastoma relative to normal brain. NNMT was preferentially expressed by mesenchymal glioblastoma stem cells (GSCs). NNMT depletes S-adenosyl methionine (SAM), a methyl donor generated from methionine. GSCs contained lower levels of methionine, SAM, and nicotinamide, but they contained higher levels of oxidized nicotinamide adenine dinucleotide (NAD+) than differentiated tumor cells. In concordance with the poor prognosis associated with DNA hypomethylation in glioblastoma, depletion of methionine, a key upstream methyl group donor, shifted tumors toward a mesenchymal phenotype and accelerated tumor growth. Targeting NNMT expression reduced cellular proliferation, self-renewal, and in vivo tumor growth of mesenchymal GSCs. Supporting a mechanistic link between NNMT and DNA methylation, targeting NNMT reduced methyl donor availability, methionine levels, and unmethylated cytosine, with increased levels of DNA methyltransferases, DNMT1 and DNMT3A. Supporting the clinical significance of these findings, NNMT portended poor prognosis for glioblastoma patients. Collectively, our findings support NNMT as a GSC-specific therapeutic target in glioblastoma by disrupting oncogenic DNA hypomethylation.

Authors

Jinkyu Jung, Leo J.Y. Kim, Xiuxing Wang, Qiulian Wu, Tanwarat Sanvoranart, Christopher G. Hubert, Briana C. Prager, Lisa C. Wallace, Xun Jin, Stephen C. Mack, Jeremy N. Rich

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Figure 5

Decreased in vitro mesenchymal GSC growth and self-renewal capacity upon targeting NNMT.

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Decreased in vitro mesenchymal GSC growth and self-renewal capacity upon...
(A and B) Measurement of cell viability and sphere number formation after transient transfection with either siCTRL or siNNMT in proneural and mesenchymal GSCs. Data represented as box and whisker plots of at least 3 independent experiments. (C) Display of sphere size with siNNMT in T3565 and T4121 GSCs. Scale bars: 300 μm. (D) Apoptosis analysis using by PARP-1 cleavage in T4121 GSCs transduced with shCTRL, shNNMT.840, or shNNMT.330 lentivirus. (E) In vitro limiting dilution assay and (F) cell viability assay of T4121 GSCs transduced with shCTRL, shNNMT.840, or shNNMT.330 lentivirus. (G–J) In vitro limiting dilution assay and cell viability assay of (G and H) T3264 or (I and J) GSC20 GSCs transduced with shCTRL, shNNMT.840, shNNMT.330, shNAMPT.1140, or shNAMPT.1183 lentivirus. χ2 test was used for pair-wise differences in stem population frequency. Nonparametric Mann-Whitney U test was used to determine significance in differences between median of shNNMT and shNAMPT treated samples.

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