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Pathogenic POLRMT variants in mice impair mtDNA transcription and affect perinatal survival
David Alsina, Diana Rubalcava-Gracia, Kristina Bubb, Rodolfo Garcia-Villegas, Akos Vegvari, Roberta Filograna, Florian A. Rosenberger, Camilla Koolmeister, Nils-Göran Larsson
David Alsina, Diana Rubalcava-Gracia, Kristina Bubb, Rodolfo Garcia-Villegas, Akos Vegvari, Roberta Filograna, Florian A. Rosenberger, Camilla Koolmeister, Nils-Göran Larsson
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Research Article Cell biology Metabolism

Pathogenic POLRMT variants in mice impair mtDNA transcription and affect perinatal survival

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Abstract

Mitochondrial gene expression is essential for oxidative phosphorylation that generates the bulk of the cellular ATP, and mitochondrial dysfunction is a common cause of human metabolic diseases. Recently, the first pathogenic variants in the only known mitochondrial RNA polymerase (POLRMT) were described in patients presenting with a wide variety of clinical manifestations, including hypotonia, short stature, and developmental delay. Here, we modeled two human pathogenic POLRMT variants by creating the corresponding substitutions in mice: the dominant S582F and the recessive R984C variant. Mice homozygous for the R984C variant showed perinatal lethality without apparent embryonic developmental defects, a finding consistent with a failure to adapt to the metabolic transition to oxidative metabolism at birth. Mice carrying the S582F variant were viable and exhibited decreased mitochondrial transcript levels due to impaired de novo transcription. However, mtDNA levels and in organello mtDNA replication remained normal, which recapitulates the molecular phenotypes observed in patients. Altogether, our findings indicate that the conserved arginine near the active site is essential for POLRMT function, while the serine in the intercalating hairpin of the N-terminal domain is required for near-genome length transcription but not primase activity. This study highlights genotype-phenotype differences and provides new insights into POLRMT function.

Authors

David Alsina, Diana Rubalcava-Gracia, Kristina Bubb, Rodolfo Garcia-Villegas, Akos Vegvari, Roberta Filograna, Florian A. Rosenberger, Camilla Koolmeister, Nils-Göran Larsson

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Figure 5

Age-dependent decline in mitochondrial transcript levels and in organello transcription activity in Polrmt-knockin mice.

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Age-dependent decline in mitochondrial transcript levels and in organell...
(A) Mitochondrial and Polrmt transcript levels in heart from wild-type (+/+), heterozygous (+/S582F), and homozygous (S582F/S582F) Polrmt-knockin mice at 15 weeks of age. Transcript levels were measured by RT-qPCR, normalized to Actb, and plotted relative to the wild-type group. Data are presented as mean ± SEM, n = 7 biological replicates per group. Data were analyzed with 2-way ANOVA followed by Dunnett’s multiple-comparison test, *P <0.05, **P < 0.01. (B) Mitochondrial and Polrmt transcript levels in heart from wild-type (+/+), heterozygous (+/S582F), and homozygous (S582F/S582F) Polrmt-knockin mice at 90 weeks of age. Transcript levels were measured by RT-qPCR, normalized to Actb, and plotted relative to the wild-type group. Data are presented as mean ± SEM, n = 5 biological replicates per group. Data were analyzed with 2-way ANOVA followed by Dunnett’s multiple-comparison test, *P < 0.05, ****P < 0.0001. (C) In organello synthesized mitochondrial transcripts were radiolabeled in isolated heart mitochondria from wild-type (+/+), heterozygous (+/S582F), and homozygous (S582F/S582F) Polrmt-knockin mice at 90 weeks of age. Input was monitored by Western blotting for voltage-dependent anion channel (VDAC) after labeling. A representative experiment is shown. (D) Densitometric quantification of in organello transcription activity. Signal from every lane was normalized to its respective VDAC signal and plotted relative to the wild-type group. Data are presented as mean ± SEM, n = 4 biological replicates per group. Data were analyzed with 1-way ANOVA followed by Dunnett’s multiple-comparison test, **P < 0.01, ***P < 0.001. (E) De novo synthesized DNA was radiolabeled in isolated heart mitochondria from wild-type (+/+), heterozygous (+/S582F), and homozygous (S582F/S582F) Polrmt-knockin mice at 90 weeks of age. Input was monitored by Western blotting for VDAC after labeling.

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