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Splice modulation of COL4A5 reinstates collagen IV assembly in an organoid model of Alport syndrome
Hassan Saei, Bruno Estebe, Nicolas Goudin, Mahsa Esmailpour, Julie Haure, Olivier Gribouval, Christelle Arrondel, Vincent Moriniere, Pinyuan Tian, Rachel Lennon, Corinne Antignac, Geraldine Mollet, Guillaume Dorval
Hassan Saei, Bruno Estebe, Nicolas Goudin, Mahsa Esmailpour, Julie Haure, Olivier Gribouval, Christelle Arrondel, Vincent Moriniere, Pinyuan Tian, Rachel Lennon, Corinne Antignac, Geraldine Mollet, Guillaume Dorval
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Research Article Genetics Nephrology

Splice modulation of COL4A5 reinstates collagen IV assembly in an organoid model of Alport syndrome

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Abstract

Kidney organoids are an emerging tool for disease modeling, especially genetic diseases. Among these diseases, X-linked Alport syndrome (XLAS) is a hematuric nephropathy affecting the glomerular basement membrane (GBM) secondary to pathogenic variations in the COL4A5 gene encoding the α5 subunit of type IV collagen [α5(IV)]. In patients carrying pathogenic variations affecting splicing, the use of antisense oligonucleotides (ASOs) offers immense therapeutic hope. In this study, we develop a framework combining the use of patient-derived cells and kidney organoids to provide evidence of the therapeutic efficacy of ASOs in XLAS patients. Using multiomics analysis, we describe the development of GBM in WT and mutated human kidney organoids. We show that GBM maturation is a dynamic process, which requires long organoid culture. Then, using semi-automated quantification of α5(IV) at basement membranes in organoids carrying the splicing variants identified in patients, we demonstrate the efficacy of ASO treatment for α5(IV) restoration. These data contribute to our understanding of the development of GBM in kidney organoids and pave the way for a therapeutic screening platform for patients.

Authors

Hassan Saei, Bruno Estebe, Nicolas Goudin, Mahsa Esmailpour, Julie Haure, Olivier Gribouval, Christelle Arrondel, Vincent Moriniere, Pinyuan Tian, Rachel Lennon, Corinne Antignac, Geraldine Mollet, Guillaume Dorval

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Figure 7

Successful restoration of aberrant splicing in XLAS organoid models by antisense oligonucleotide therapy.

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Successful restoration of aberrant splicing in XLAS organoid models by a...
(A) Experimental timeline of the PMO treatment (5 μM) in organoids, starting at day 10+4, including media changes every 3 days and harvesting for molecular imaging–based analysis at day 38. (B) Immunofluorescence images showing PMO uptake (FAM-PMO, green) in PEC-like cells and tubule LTL+ cells (yellow) and podocytes after a single PMO transfection over 3 days (started at 10+8), demonstrating efficient uptake in tubular epithelial cells, PEC-like cells, and podocytes (black arrows). Scale bar: 100 µm. (C) RT-PCR and targeted RNA-seq results before and after PMO treatment of both severe and moderate models showing a reduction of mutant COL4A5 transcript and correction of splicing following PMO treatment in both models. (D) Quantification of normal to mutant COL4A5 transcript ratio, demonstrating a promising splice modulation capability of PMOs in organoids (n = 3 in each group, 2-way ANOVA).

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