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TFAP2A orchestrates gene regulatory networks and tubular architecture in kidney outer medullary collecting ducts
Janna Leiz, … , Christian Hinze, Kai M. Schmidt-Ott
Janna Leiz, … , Christian Hinze, Kai M. Schmidt-Ott
Published August 28, 2025
Citation Information: JCI Insight. 2025;10(19):e192361. https://doi.org/10.1172/jci.insight.192361.
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Research Article Cell biology Nephrology

TFAP2A orchestrates gene regulatory networks and tubular architecture in kidney outer medullary collecting ducts

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Abstract

Mutations in the transcription factor TFAP2A are linked to congenital anomalies of the kidney and urinary tract in humans. While Tfap2a knockout (KO) in mouse collecting ducts leads to tubular epithelial abnormalities, its precise molecular functions in kidney tubules remain unclear. To investigate Tfap2a-dependent gene regulatory networks in the mouse kidney collecting ducts, we employed conditional KO (Hoxb7-Cre; Tfap2afl/fl) models combined with transcriptomics. Histomorphological and physiological assessments of Tfap2a-KO mice revealed progressive postnatal dilation of the outer medullary collecting ducts. Integrating bulk and single-nucleus RNA sequencing with in silico motif mapping in ATAC-seq datasets demonstrated that Tfap2a is highly expressed and active in normal collecting duct principal cells. Comparative transcriptomics between 3-month-old Tfap2a-KO and control mice identified dysregulated genes associated with cell adhesion and WNT signaling, including Alcam and Wnt9b. These changes were confirmed by in situ hybridization. Our findings reveal that Tfap2a regulates medullary collecting duct diameter by orchestrating a transcriptional network involving Wnt9b and Alcam, providing insights into its role in kidney structural integrity.

Authors

Janna Leiz, Karen I. López-Cayuqueo, Shuang Cao, Louisa M.S. Gerhardt, Christian Hinze, Kai M. Schmidt-Ott

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Figure 3

Hoxb7Cre+;Tfap2afl/fl mice display reduced kidney weights but normal kidney function.

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Hoxb7Cre+;Tfap2afl/fl mice display reduced kidney weights but normal ki...
(A) Breeding strategy to generate a collecting duct–specific knockout of Tfap2a. The loxP sites flank exons 5 and 6 encoding part of the DNA binding and dimerization domain, resulting in a loss of function after their excision. Primers (indicated by arrows) for knockout validation and respective product sizes after splicing are indicated below the alleles. (B) Knockout validation on cDNA from adult whole kidney and microdissected papillary tissue. Control animals (CTRL) displayed full-length alleles (416 bp), whereas Hoxb7Cre+;Tfap2afl/fl (KO) mice showed shortened knockout alleles (115 bp). In whole kidney tissue, WT Tfap2a mRNA was still expressed, likely due to maintained expression in distal tubules. In papillary tissues, devoid of distal tubules, no residual WT Tfap2a mRNA was detected. (C) Expression levels of Tfap2a mRNA normalized to β-actin mRNA expression in whole kidney samples of newborn (P1–P2) control and Hoxb7Cre+;Tfap2afl/fl mice. Tfap2a expression was downregulated by approximately 60%. (D) Kidney/body weight ratios of 3-month-old control and Hoxb7Cre+;Tfap2afl/fl mice. (E and F) Serum urea and serum creatinine of 3-month-old control and Hoxb7Cre+;Tfap2afl/fl mice. n ≥ 5 mice per group. Data are expressed as mean ± SD. Statistical significance was determined using a 2-tailed t test, without assuming a consistent SD. NS, not significant. **P < 0.01, ***P < 0.001.

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