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Device-free isolation of photoreceptor cells from patient iPSC-derived retinal organoids
Nicholas E. Stone, Laura R. Bohrer, Nathaniel K. Mullin, Alexander Berthold, Allison T. Wright, Ian C. Han, Edwin M. Stone, Robert F. Mullins, Budd A. Tucker
Nicholas E. Stone, Laura R. Bohrer, Nathaniel K. Mullin, Alexander Berthold, Allison T. Wright, Ian C. Han, Edwin M. Stone, Robert F. Mullins, Budd A. Tucker
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Research Article Ophthalmology Stem cells

Device-free isolation of photoreceptor cells from patient iPSC-derived retinal organoids

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Abstract

Autologous photoreceptor cell replacement is one of the most promising strategies currently being developed for the treatment of patients with inherited retinal degenerative blindness. Induced pluripotent stem cell–derived (iPSC-derived) retinal organoids, which faithfully recapitulate the structure of the neural retina, are an ideal source of transplantable photoreceptors required for these therapies. However, retinal organoids contain other retinal cell types, including bipolar, horizontal, and amacrine cells, which are unneeded and may reduce the potency of the final therapeutic product. Therefore, approaches for isolating fate-committed photoreceptor cells from dissociated retinal organoids are desirable. In this work, we present partial dissociation, a technique that leverages the high level of organization found in retinal organoids to enable selective enrichment of photoreceptor cells without the use of specialized equipment or reagents such as antibody labels. We demonstrate up to 90% photoreceptor cell purity by simply selecting cell fractions liberated from retinal organoids during enzymatic digestion in the absence of mechanical dissociation. Since the presented approach relies on the use of standard plasticware and commercially available current good manufacturing practice–compliant reagents, we believe that it is ideal for use in the preparation of clinical photoreceptor cell replacement therapies.

Authors

Nicholas E. Stone, Laura R. Bohrer, Nathaniel K. Mullin, Alexander Berthold, Allison T. Wright, Ian C. Han, Edwin M. Stone, Robert F. Mullins, Budd A. Tucker

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Figure 5

Partial dissociation of a patient line presorted by organoid organization.

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Partial dissociation of a patient line presorted by organoid organizatio...
Prior to performing staged partial dissociation, line 5 organoids produced during a single round of differentiation were sorted into “well-organized” and “poorly organized” groups. (A and B) Bar and UMAP plots showing the relative proportion and gene expression patterns of cells collected during control dissociations of each group of organoids. (C–J) Photoreceptor purity and dissociation rate as a function of dissociation time. Each row shows a representative organoid (C and G) along with the photoreceptor purity (D and H) (dashed line shows the photoreceptor purity of a control dissociation of the same cell line), cell recovery (E and I), and photoreceptor enrichment (F and J) (fold change relative to a control dissociation) for each fraction recovered during staged partial dissociation. Cell fractions were taken after 20, 40, and 60 minutes of total dissociation time, after which the remaining aggregates were fully dissociated via trituration (full) and collected. The 40-minute time point is missing from the purity and enrichment panels (H and J) due to not enough cells being collected for scRNA-Seq analysis. UMAP plots for all samples and time points are available in Supplemental Figure 2. Relative proportions of annotated cell types are available in Supplemental Table 5. Raw cell counts used to prepare recovery plots are available in Supplemental Table 6. Representative ICC of day 160 line 5 organoids is available in Supplemental Figure 3.

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