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Tregs epigenetically reprogrammed from autoreactive effector T cells mitigate established autoimmunity
Tyler R. Colson, James J. Cameron, Hayley I. Muendlein, Mei-An Nolan, Jamie L. Leiriao, James H. Kim, Alexander N. Poltorak, Xudong Li
Tyler R. Colson, James J. Cameron, Hayley I. Muendlein, Mei-An Nolan, Jamie L. Leiriao, James H. Kim, Alexander N. Poltorak, Xudong Li
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Research Article Immunology Inflammation

Tregs epigenetically reprogrammed from autoreactive effector T cells mitigate established autoimmunity

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Abstract

Reprogramming autoreactive CD4+ effector T (Teff) cells into immunosuppressive Tregs represents a promising strategy for treating established autoimmune diseases. However, the stability and function of such reprogrammed Tregs under inflammatory conditions remain unclear. Here, we show that demethylation of core Treg identity genes in Teff cells yields lineage-stable effector T cell reprogrammed Tregs (ER-Tregs). A single adoptive transfer of ER-Tregs not only prevents autoimmune neuroinflammation in mice when given before disease onset but also arrests its progression when administered after onset. Compared with Foxp3-overexpressing Teff cells, induced Tregs from naive precursors, and endogenous Tregs, ER-Tregs provide superior protection against autoimmune neuroinflammation. This enhanced efficacy stems from their inherited autoantigen specificity and selectively preserved effector cell transcriptional programs, which together bolster their fitness in inflammatory environments and enhance their suppressive capacity. Our results establish epigenetic reprogramming of autoreactive Teff cells as an effective approach to generate potent, stable Tregs for the treatment of refractory autoimmune conditions.

Authors

Tyler R. Colson, James J. Cameron, Hayley I. Muendlein, Mei-An Nolan, Jamie L. Leiriao, James H. Kim, Alexander N. Poltorak, Xudong Li

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Figure 6

ER-Tregs exhibit elevated expression of select parental Teff genes.

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ER-Tregs exhibit elevated expression of select parental Teff genes.
(A–F...
(A–F) RNA-Seq analysis of the transcriptomes of ER-Tregs, nTregs, and CD4+ Teff cells. CD45.1+Foxp3Thy1.1 ER-Tregs were adoptively transferred into CD45.2+Foxp3Thy1.1 mice 1 day prior to MOG/CFA immunization. The transcriptomes of transferred ER-Tregs and host nTreg and CD4+ Teff cells were determined by bulk RNA-Seq at 7 dpi. (A) Principal component analysis of ER-Treg, nTreg, and CD4+ Teff transcriptomes. (B) Volcano plot showing the differential expression of genes between ER-Tregs and Teff cells. (C) Gene set enrichment analysis (GSEA) of the expression of Treg-specific genes in ER-Tregs and nTregs. (D) Volcano plot showing the differential expression of genes between ER-Tregs and nTregs. (E) Normalized gene expression levels for selected lists of T helper genes in ER-Tregs and nTregs. (F) GSEA of the expression of indicated gene sets in ER-Tregs and nTregs. (G) Flow cytometry of c-Maf and RORγt expression in MOG/CFA-primed 2D2 nTregs and ER-Tregs following in vitro activation in the presence of IL-2 for 3 days. (H) Flow cytometry of RORγt and Foxp3-Thy1.1 expression in CD4+ Tn cells and in vitro differentiated T helper cells following their 1° stimulation under the ER-Treg reprogramming condition. Data are shown as mean ± SEM. ****P < 0.0001, 1-way ANOVA and Holm-Šídák test in H.

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