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Mechanisms and efficacy of small molecule latency-promoting agents to inhibit HIV reactivation ex vivo
Julie Janssens, Peggy Kim, Sun Jin Kim, Adam Wedrychowski, Gayatri N. Kadiyala, Peter W. Hunt, Steven G. Deeks, Joseph K. Wong, Steven A. Yukl
Julie Janssens, Peggy Kim, Sun Jin Kim, Adam Wedrychowski, Gayatri N. Kadiyala, Peter W. Hunt, Steven G. Deeks, Joseph K. Wong, Steven A. Yukl
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Research Article Virology

Mechanisms and efficacy of small molecule latency-promoting agents to inhibit HIV reactivation ex vivo

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Abstract

Drugs that inhibit HIV transcription and/or reactivation of latent HIV have been proposed as a strategy to reduce HIV-associated immune activation or to achieve a functional cure, yet comparative studies are lacking. We evaluated 26 drugs, including drugs previously reported to inhibit HIV transcription (inhibitors of Tat-dependent HIV transcription, Rev, HSF-1/PTEF-b, HSP90, Jak/Stat, or SIRT1/Tat deacetylation) and other agents that were not tested before (inhibitors of PKC, NF-κB, SP-1, or histone acetyltransferase; NR2F1 agonists), elongation (inhibitors of CDK9/ PTEF-b), completion (inhibitors of PolyA-polymerase), or splicing (inhibitors of human splice factors). To investigate if those drugs would vary in their ability to affect different blocks to HIV transcription, we measured levels of initiated, elongated, midtranscribed, completed, and multiply spliced HIV RNA in PBMCs from antiretroviral therapy–suppressed individuals following ex vivo treatment with each drug and subsequent T cell activation. We identified new drugs that prevent HIV reactivation, including CDK and splicing inhibitors. While some drugs inhibited 1 or 2 steps, other drugs (CDK inhibitors, splicing inhibitors, tanespimycin, and triptolide) inhibited multiple stages of HIV transcription and blocked the production of supernatant viral RNA. These drugs and targets deserve further study in strategies aimed at reducing HIV-associated immune activation or achieving a functional cure.

Authors

Julie Janssens, Peggy Kim, Sun Jin Kim, Adam Wedrychowski, Gayatri N. Kadiyala, Peter W. Hunt, Steven G. Deeks, Joseph K. Wong, Steven A. Yukl

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Figure 5

Several LPAs block the production of viral RNA in supernatant after T cell activation.

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Several LPAs block the production of viral RNA in supernatant after T ce...
Each drug was tested in PBMCs from 6 ART-suppressed study participants (except for triptolide, n = 5). PBMCs were aliquoted into wells at 6 × 106 cells/well. After activation, the cells were cultured with antiretrovirals in the presence of individual drugs in DMSO or DMSO alone as control. All conditions were tested in the presence of CD3/28 T cell–activating beads, except for the unactivated DMSO condition. After 6 days, RNA was extracted from the culture supernatant. Polyadenylated HIV RNA in the supernatant was quantified by RT-ddPCR, expressed as copies/mL, and then normalized to the levels of the activated DMSO (% of activated DMSO). Medians and IQR are presented, as well as the individual values per study participant in different colors. Comparisons were performed using Wilcoxon’s signed-rank test.

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