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Repurposing of lonafarnib as a treatment for SARS-CoV-2 infection
Mohsin Khan, Parker Irvin, Seung Bum Park, Hannah M. Ivester, Inna Ricardo-Lax, Madeleine Leek, Ailis Grieshaber, Eun Sun Jang, Sheryl Coutermarsh-Ott, Qi Zhang, Nunziata Maio, Jian-Kang Jiang, Bing Li, Wenwei Huang, Amy Q. Wang, Xin Xu, Zongyi Hu, Wei Zheng, Yihong Ye, Tracey Rouault, Charles Rice, Irving C. Allen, T. Jake Liang
Mohsin Khan, Parker Irvin, Seung Bum Park, Hannah M. Ivester, Inna Ricardo-Lax, Madeleine Leek, Ailis Grieshaber, Eun Sun Jang, Sheryl Coutermarsh-Ott, Qi Zhang, Nunziata Maio, Jian-Kang Jiang, Bing Li, Wenwei Huang, Amy Q. Wang, Xin Xu, Zongyi Hu, Wei Zheng, Yihong Ye, Tracey Rouault, Charles Rice, Irving C. Allen, T. Jake Liang
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Research Article COVID-19 Virology

Repurposing of lonafarnib as a treatment for SARS-CoV-2 infection

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Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), which causes coronavirus disease 2019 (COVID-19), has emerged as a global pandemic pathogen with high mortality. While treatments have been developed to reduce morbidity and mortality of COVID-19, more antivirals with broad-spectrum activities are still needed. Here, we identified lonafarnib (LNF), a Food and Drug Administration–approved inhibitor of cellular farnesyltransferase (FTase), as an effective anti–SARS-CoV-2 agent. LNF inhibited SARS-CoV-2 infection and acted synergistically with known anti-SARS antivirals. LNF was equally active against diverse SARS-CoV-2 variants. Mechanistic studies suggested that LNF targeted multiple steps of the viral life cycle. Using other structurally diverse FTase inhibitors and a LNF-resistant FTase mutant, we demonstrated a key role of FTase in the SARS-CoV-2 life cycle. To demonstrate in vivo efficacy, we infected SARS-CoV-2–susceptible humanized mice expressing human angiotensin-converting enzyme 2 (ACE2) and treated them with LNF. LNF at a clinically relevant dose suppressed the viral titer in the respiratory tract and improved pulmonary pathology and clinical parameters. Our study demonstrated that LNF, an approved oral drug with excellent human safety data, is a promising antiviral against SARS-CoV-2 that warrants further clinical assessment for treatment of COVID-19 and potentially other viral infections.

Authors

Mohsin Khan, Parker Irvin, Seung Bum Park, Hannah M. Ivester, Inna Ricardo-Lax, Madeleine Leek, Ailis Grieshaber, Eun Sun Jang, Sheryl Coutermarsh-Ott, Qi Zhang, Nunziata Maio, Jian-Kang Jiang, Bing Li, Wenwei Huang, Amy Q. Wang, Xin Xu, Zongyi Hu, Wei Zheng, Yihong Ye, Tracey Rouault, Charles Rice, Irving C. Allen, T. Jake Liang

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Figure 5

Effect of other FTase inhibitors on SARS-CoV-2 infection.

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Effect of other FTase inhibitors on SARS-CoV-2 infection.
(A) The chemic...
(A) The chemical structures of LNF, tipifarnib, and FTI-277. (B) Dose-response curves of LNF, tipifarnib, and FTI-277 were prepared and relative replication was graphed. The VeroE6 cells were infected with SARS-CoV-2-nLuc and treated with these 3 drugs followed by luciferase activity measurement at 24 hours after infection. The red and black series represent percentage viral luciferase and cell viability, respectively. All data points represent mean ± SEM (n = 4) and the figure is representative of 3 independent experiments. The red and black series represent the level of viral infection and cell death, respectively. (C) Shift in the mobility of HDJ2 protein was assessed using Western blotting. The cells were treated with multiple concentrations of the drug and at 24 hours after treatment, the lysates were prepared and resolved using SDS-PAGE followed by transfer of the separated proteins to a nitrocellulose membrane. The membrane was probed with anti-HDJ2 (Invitrogen) and anti-GAPDH (Santa Cruz Biotechnology). A shift in electrophoretic mobility of HDJ2 is indicated by arrows. This experiment was conducted 2 times, and the blots are representative. (D) Time-of-addition assay was performed using VeroE6 cells treated with tipifarnib (10 μM) and FTI-277 (300 μM). Please see the schematic in Figure 4A. The infected cells were treated with the drug for varying durations of pre- and postinfection times and the luciferase activity was measured. The relative replication was plotted, where all data points represent mean ± SEM (n = 8) and the figure is representative of 3 independent experiments. NS, P > 0.05; ***P < 0.001, ****P < 0.0001 by 1-way ANOVA with Dunnett’s test for multiple comparisons to DMSO control. (E) Efficacy of LNF was tested in VeroE6 cells transfected with WT and mutant FNTB plasmids. At 48 hours after transfections, cells were infected with SARS-CoV-2-nLuc and luciferase activity was measured at 24 hours after infection. Data are presented as mean ± SEM (n = 4). The results are representative of 3 independent experiments.

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