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Bank1 modulates the differentiation and molecular profile of key B cell populations in autoimmunity
Gonzalo Gómez Hernández, Toro Domínguez, Georgina Galicia, María Morell, Marta E. Alarcón-Riquelme
Gonzalo Gómez Hernández, Toro Domínguez, Georgina Galicia, María Morell, Marta E. Alarcón-Riquelme
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Research Article Genetics

Bank1 modulates the differentiation and molecular profile of key B cell populations in autoimmunity

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Abstract

This study aimed at defining the role of the B cell adaptor protein BANK1 in the appearance of age-associated B cells (ABCs) in 2 SLE mouse models (TLR7.tg6 and imiquimod-induced mice), crossed with Bank1–/– mice. The absence of Bank1 led to a significant reduction in ABC levels, also affecting other B cell populations. To gain deeper insights into their differentiation pathway and the effect of Bank1 on B cell populations, a single-cell transcriptome assay was performed. In the TLR7.tg6 model, we identified 10 clusters within B cells, including an ABC-specific cluster that was decreased in Bank1-deficient mice. In its absence, ABCs exhibited an antiinflammatory gene expression profile, while being proinflammatory in Bank1-sufficient lupus-prone mice. Trajectory analyses revealed that ABCs originated from marginal zone and memory-like B cells, ultimately acquiring transcriptional characteristics associated with atypical memory cells and long-lived plasma cells. Also, Bank1 deficiency normalized the presence of naive B cells, which were nearly absent in lupus-prone mice. Interestingly, Bank1 deficiency significantly reduced a distinct cluster containing IFN-responsive genes. These findings underscore the critical role of Bank1 in ABC development, affecting early B cell stages toward ABC differentiation, and the presence of IFN-stimulated gene–containing B cells, both populations determinant for autoimmunity.

Authors

Gonzalo Gómez Hernández, Toro Domínguez, Georgina Galicia, María Morell, Marta E. Alarcón-Riquelme

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Figure 4

Clustering of B cells from scRNA-Seq analysis.

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Clustering of B cells from scRNA-Seq analysis.
(A) Two-dimensional UMAP ...
(A) Two-dimensional UMAP projection of scRNA-Seq data showing clusters of B cells among total splenocytes from the TLR7.tg6 model. Total mice analyzed: WT (n = 3), T7 (n = 3), T7.B1–/– (n = 3). (B) Bar plot representing the cell abundance of each cluster across samples and conditions (WT, TLR7.tg6, and TLR7.tg6.Bank1–/–). (C) Proportion of cells belonging to each cluster per group. Colors represent the different B cell clusters. (D) Individual UMAPs from each condition. (E) Heatmap showing the expression of the most characteristic markers from each B cell subpopulation comparing each cluster against the remaining clusters. Color scale represent the normalized expression by Z score.

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ISSN 2379-3708

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