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YBX1 promotes type H vessel–dependent bone formation in an m5C-dependent manner
Yu-Jue Li, Qi Guo, Ming-Sheng Ye, GuangPing Cai, Wen-Feng Xiao, Sheng Deng, Ye Xiao
Yu-Jue Li, Qi Guo, Ming-Sheng Ye, GuangPing Cai, Wen-Feng Xiao, Sheng Deng, Ye Xiao
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Research Article Angiogenesis Bone biology

YBX1 promotes type H vessel–dependent bone formation in an m5C-dependent manner

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Abstract

RNA-binding proteins (RBPs) interact with RNA and ubiquitously regulate RNA transcripts during their life cycle, playing a fundamental role in the progression of angiogenesis-related diseases. In the skeletal system, endothelium-dependent angiogenesis is indispensable for bone formation. However, the role of RBPs in endothelium-dependent bone formation is unclear. Here, we show that RBP–Y-box-binding protein 1 (YBX1) was strongly reduced in the bone vasculature of ovariectomy (OVX) mice. Endothelial cell–specific deletion of Ybx1 impaired CD31-high, endomucin-high (CD31hiEMCNhi) endothelium morphology and resulted in low bone mass whereas Ybx1 overexpression promoted angiogenesis-dependent osteogenesis and ameliorated bone loss. Mechanistically, YBX1 deletion disrupted CD31, EMCN, and bone morphogenetic protein 4 (BMP4) stability in an m5C-dependent manner and blocked endothelium-derived BMP4 release, thereby inhibiting osteogenic differentiation of bone mesenchymal stromal cells. Administration of recombinant BMP4 protein restored impaired bone formation in Ybx1 deletion mice. Tail vein injection of CD31-modified polyethylene glycol–poly (lactic-co-glycolic acid) carrying sciadopitysin, a natural YBX1 agonist, pharmacologically partially reversed CD31hiEMCNhi vessels’ decline and improved bone mass in both OVX and aging animals. These findings demonstrated the role of RBP-YBX1 in angiogenesis-dependent bone formation and provided a therapeutic approach for ameliorating osteoporosis.

Authors

Yu-Jue Li, Qi Guo, Ming-Sheng Ye, GuangPing Cai, Wen-Feng Xiao, Sheng Deng, Ye Xiao

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Figure 4

YBX1 depletion leads to decreasing CD31 and EMCN stability in an m5C-dependent manner.

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YBX1 depletion leads to decreasing CD31 and EMCN stability in an m5C-de...
(A) Genomic distribution of YBX1 CLIP-Seq peaks. (B) Venn diagram representing the overlap genes between YBX1 CLIP-Seq targets and YBX1-knockdown RNA-Seq targets. (C) Top 2 ranked sequence motifs enriched in YBX1 CLIP-Seq. (D–F) Genomic view of YBX1 binding to CD31, EMCN, and BMP4 loci. The frame area is 3′-UTR. (G) Semiquantitative PCR showed RBP immunoprecipitates using m5C RIP kit. (H and I) RNA pulldown analysis of binding between YBX1 protein and CD31 (or BMP4)–WT (or MUT)–probe. (J) Relative luciferase activity of HEK293T cells transfected with different pGL-4 vectors and pCMV-YBX1. (K–M) RT-qPCR analysis of the BMP4, CD31, and EMCN mRNA degradation rate of HUVECs treated with shYBX1 (blue lines) or shControl (red lines). (N) Western blotting analysis of the relative levels of CD31, BMP4, EMCN, and YBX1 protein expression. n = 3 independent experiments. Data are shown as the mean ± SEM. ***P < 0.001 by 1-way ANOVA. CDS, coding sequences.

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