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Single-cell transcriptomics reveals variations in monocytes and Tregs between gout flare and remission
Hanjie Yu, Wen Xue, Hanqing Yu, Yaxiang Song, Xinying Liu, Ling Qin, Shu Wang, Hui Bao, Hongchen Gu, Guangqi Chen, Dake Zhao, Yang Tu, Jiafen Cheng, Liya Wang, Zisheng Ai, Dayong Hu, Ling Wang, Ai Peng
Hanjie Yu, Wen Xue, Hanqing Yu, Yaxiang Song, Xinying Liu, Ling Qin, Shu Wang, Hui Bao, Hongchen Gu, Guangqi Chen, Dake Zhao, Yang Tu, Jiafen Cheng, Liya Wang, Zisheng Ai, Dayong Hu, Ling Wang, Ai Peng
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Research Article Immunology Inflammation

Single-cell transcriptomics reveals variations in monocytes and Tregs between gout flare and remission

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Abstract

Gout commonly manifests as a painful, self-limiting inflammatory arthritis. Nevertheless, the understanding of the inflammatory and immune responses underlying gout flares and remission remains ambiguous. Here, based on single-cell RNA-Seq and an independent validation cohort, we identified the potential mechanism of gout flare, which likely involves the upregulation of HLA-DQA1+ nonclassical monocytes and is related to antigen processing and presentation. Furthermore, Tregs also play an essential role in the suppressive capacity during gout remission. Cell communication analysis suggested the existence of altered crosstalk between monocytes and other T cell types, such as Tregs. Moreover, we observed the systemic upregulation of inflammatory and cytokine genes, primarily in classical monocytes, during gout flares. All monocyte subtypes showed increased arachidonic acid metabolic activity along with upregulation of prostaglandin-endoperoxide synthase 2 (PTGS2). We also detected a decrease in blood arachidonic acid and an increase in leukotriene B4 levels during gout flares. In summary, our study illustrates the distinctive immune cell responses and systemic inflammation patterns that characterize the transition from gout flares to remission, and it suggests that blood monocyte subtypes and Tregs are potential intervention targets for preventing recurrent gout attacks and progression.

Authors

Hanjie Yu, Wen Xue, Hanqing Yu, Yaxiang Song, Xinying Liu, Ling Qin, Shu Wang, Hui Bao, Hongchen Gu, Guangqi Chen, Dake Zhao, Yang Tu, Jiafen Cheng, Liya Wang, Zisheng Ai, Dayong Hu, Ling Wang, Ai Peng

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Figure 2

Functions of each monocyte subtype that contribute to immune responses in patients with gout flare and remission.

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Functions of each monocyte subtype that contribute to immune responses i...
(A) The t-SNE representations of integrated single-cell transcriptomes for the 7,499 myeloid cells (n = 6), color-coded by disease (left), and cell types (right). (B) Expression levels of canonical cell markers used to label clusters. Dot plot represented by color gradient, with low expression depicted by blue and high expression shown in red. (C) Bar plot of cell fractions for myeloid cell subtypes stratified by groups. (D) Heatmap of the DEGs among monocyte subtypes between gout flare and gout remission. The heatmap is colored by average log(FC). All displayed genes are statistically significant at P<0.05. (E) t-SNE plots illustrating the expression of characteristic cytokine markers in monocyte subtypes. Feature plot represented by color gradient, with low expression shown in gray and high expression depicted in red. (F) Heatmap of the AUC score t values for the expression regulation by transcription factors of monocytes subtypes, as estimated using SCENIC. (G) The regulon-specific AUC score t values for the expression regulation by transcription factors of the monocyte subtypes, as estimated by SCENIC.

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