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Circular RNA Cdr1as inhibits proliferation and delays injury-induced regeneration of the intestinal epithelium
Hee Kyoung Chung, Lan Xiao, Naomi Han, Jason Chen, Vivian Yao, Cassandra M. Cairns, Benjamin Raufman, Jaladanki N. Rao, Douglas J. Turner, Rosemary Kozar, Myriam Gorospe, Jian-Ying Wang
Hee Kyoung Chung, Lan Xiao, Naomi Han, Jason Chen, Vivian Yao, Cassandra M. Cairns, Benjamin Raufman, Jaladanki N. Rao, Douglas J. Turner, Rosemary Kozar, Myriam Gorospe, Jian-Ying Wang
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Research Article Gastroenterology

Circular RNA Cdr1as inhibits proliferation and delays injury-induced regeneration of the intestinal epithelium

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Abstract

Circular RNAs (circRNAs) are highly expressed in the mammalian intestinal epithelium, but their functions remain largely unknown. Here, we identified the circRNA Cdr1as as a repressor of intestinal epithelial regeneration and defense. Cdr1as levels increased in mouse intestinal mucosa after colitis and septic stress, as well as in human intestinal mucosa from patients with inflammatory bowel disease and sepsis. Ablation of the Cdr1as locus from the mouse genome enhanced renewal of the intestinal mucosa, promoted injury-induced epithelial regeneration, and protected the mucosa against colitis. We found approximately 40 microRNAs, including miR-195, differentially expressed between intestinal mucosa of Cdr1as-knockout (Cdr1as–/–) versus littermate mice. Increasing the levels of Cdr1as inhibited intestinal epithelial repair after wounding in cultured cells and repressed growth of intestinal organoids cultured ex vivo, but this inhibition was abolished by miR-195 silencing. The reduction in miR-195 levels in the Cdr1as–/– intestinal epithelium was the result of reduced stability and processing of the precursor miR-195. These findings indicate that Cdr1as reduces proliferation and repair of the intestinal epithelium at least in part via interaction with miR-195 and highlight a role for induced Cdr1as in the pathogenesis of unhealed wounds and disrupted renewal of the intestinal mucosa.

Authors

Hee Kyoung Chung, Lan Xiao, Naomi Han, Jason Chen, Vivian Yao, Cassandra M. Cairns, Benjamin Raufman, Jaladanki N. Rao, Douglas J. Turner, Rosemary Kozar, Myriam Gorospe, Jian-Ying Wang

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Figure 4

Cdr1as deletion increases the growth of intestinal organoids.

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Cdr1as deletion increases the growth of intestinal organoids.
(A) Growt...
(A) Growth of intestinal organoids derived from the proximal small intestine of Cdr1as–/– and control littermate mice. Images were taken at different times in culture. Values are the mean ± SEM (n = 6). *P < 0.05 compared with control littermates. (B) Proliferating cells in intestinal organoids on day 3 in culture, as measured by BrdU labeling (red). *P < 0.05 compared with control littermates (n = 6). (C and D) Activity of ISCs in intestinal organoids described in B, as measured by immunostaining using markers OLFM4 and LGR5. (E and F) Changes in Paneth cells and tuft cells in intestinal organoids on day 4 in culture, as marked by lysozyme and DCLK1, respectively. Scale bars: 50 μm. In A and B, statistical significance was analyzed using unpaired, 2-tailed Student’s t test.

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