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Homeostatic cytokines reciprocally modulate the emergence of prenatal effector PLZF+CD4+ T cells in humans
Veronica Locher, … , Gabriela K. Fragiadakis, Joanna Halkias
Veronica Locher, … , Gabriela K. Fragiadakis, Joanna Halkias
Published October 19, 2023
Citation Information: JCI Insight. 2023;8(22):e164672. https://doi.org/10.1172/jci.insight.164672.
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Research Article Development Immunology

Homeostatic cytokines reciprocally modulate the emergence of prenatal effector PLZF+CD4+ T cells in humans

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Abstract

The development of human prenatal adaptive immunity progresses faster than previously appreciated, with the emergence of memory CD4+ T cells alongside regulatory T cells by midgestation. We previously identified a prenatal specific population of promyelocytic leukemia zinc finger–positive (PLZF+) CD4+ T cells with heightened effector potential that were enriched in the developing intestine and accumulated in the cord blood of infants exposed to prenatal inflammation. However, the signals that drive their tissue distribution and effector maturation are unknown. Here, we define the transcriptional and functional heterogeneity of human prenatal PLZF+CD4+ T cells and identify the compartmentalization of T helper–like (Th-like) effector function across the small intestine (SI) and mesenteric lymph nodes (MLNs). IL-7 was more abundant in the SI relative to the MLNs and drove the preferential expansion of naive PLZF+CD4+ T cells via enhanced STAT5 and MEK/ERK signaling. Exposure to IL-7 was sufficient to induce the acquisition of CD45RO expression and rapid effector function in a subset of PLZF+CD4+ T cells, identifying a human analog of memory phenotype CD4+ T cells. Further, IL-7 modulated the differentiation of Th1- and Th17-like PLZF+CD4+ T cells and thus likely contributes to the anatomic compartmentalization of human prenatal CD4+ T cell effector function.

Authors

Veronica Locher, Sara Park, Daniel G. Bunis, Stephanie Makredes, Margareta Mayer, Trevor D. Burt, Gabriela K. Fragiadakis, Joanna Halkias

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Figure 1

Prenatal PLZF+CD4+ T cells are a heterogeneous population.

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Prenatal PLZF+CD4+ T cells are a heterogeneous population.
(A) Populatio...
(A) Population-wide RNA-Seq of prenatal small intestine (SI) PLZF+CD4+ T cells (n = 5) identifies transcriptional expression of numerous cytokines after PMA/ionomycin stimulation. Volcano plot of enriched (orange) and depleted (blue) differentially expressed (DE) gene transcripts (log2 fold-change > 1, FDR ≤ 0.05) within stimulated SI PLZF+CD4+ T cells. (B) Single-cell transcriptional analysis of memory Vα7.2–PLZF+CD4+TCRαβ+ T cells from the prenatal SI of 3 donors identifies 7 distinct clusters. Uniform manifold approximation and projection (UMAP) visualization of identified clusters within SI PLZF+CD4+ T cells in which each cluster is surrounded by a median-centered ellipse and labeled according to its functional annotation. ISG, IFN-stimulated gene. (C) Distinct transcriptional signatures within clusters of SI PLZF+CD4+ T cells. Heatmap of unsupervised hierarchical clustering of DE genes by indicated cluster. Labels indicate genes utilized to determine functional annotation. (D) Pathway enrichment analysis within clusters of SI PLZF+CD4+ T cells. Dot plot of selected Gene Ontology terms, Reactome Gene Sets, and Kyoto Encyclopedia of Genes and Genomes pathways enriched within genes DE in each cluster by Metascape analysis. Downregulated pathways are indicated with negative number of genes and outliers indicated with text overlay.

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