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Horizontal transmission of gut microbiota attenuates mortality in lung fibrosis
Stephen J. Gurczynski, Jay H. Lipinski, Joshua Strauss, Shafiul Alam, Gary B. Huffnagle, Piyush Ranjan, Lucy H. Kennedy, Bethany B. Moore, David N. O’Dwyer
Stephen J. Gurczynski, Jay H. Lipinski, Joshua Strauss, Shafiul Alam, Gary B. Huffnagle, Piyush Ranjan, Lucy H. Kennedy, Bethany B. Moore, David N. O’Dwyer
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Research Article Microbiology Pulmonology

Horizontal transmission of gut microbiota attenuates mortality in lung fibrosis

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Abstract

Pulmonary fibrosis is a chronic and often fatal disease. The pathogenesis is characterized by aberrant repair of lung parenchyma, resulting in loss of physiological homeostasis, respiratory failure, and death. The immune response in pulmonary fibrosis is dysregulated. The gut microbiome is a key regulator of immunity. The role of the gut microbiome in regulating the pulmonary immunity in lung fibrosis is poorly understood. Here, we determine the impact of gut microbiota on pulmonary fibrosis in substrains of C57BL/6 mice derived from different vendors (C57BL/6J and C57BL/6NCrl). We used germ-free models, fecal microbiota transplantation, and cohousing to transmit gut microbiota. Metagenomic studies of feces established keystone species between substrains. Pulmonary fibrosis was microbiota dependent in C57BL/6 mice. Gut microbiota were distinct by β diversity and α diversity. Mortality and lung fibrosis were attenuated in C57BL/6NCrl mice. Elevated CD4+IL-10+ T cells and lower IL-6 occurred in C57BL/6NCrl mice. Horizontal transmission of microbiota by cohousing attenuated mortality in C57BL/6J mice and promoted a transcriptionally altered pulmonary immunity. Temporal changes in lung and gut microbiota demonstrated that gut microbiota contributed largely to immunological phenotype. Key regulatory gut microbiota contributed to lung fibrosis, generating rationale for human studies.

Authors

Stephen J. Gurczynski, Jay H. Lipinski, Joshua Strauss, Shafiul Alam, Gary B. Huffnagle, Piyush Ranjan, Lucy H. Kennedy, Bethany B. Moore, David N. O’Dwyer

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Figure 7

Short-term cohousing is less effective and does not provide protection in preclinical models of bleomycin-induced lung fibrosis.

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Short-term cohousing is less effective and does not provide protection i...
(A) Study design: C57BL/6Cr mice are cohoused with C57BL/6J mice for 7 days and then treated with bleomycin to induce lung fibrosis. (B) Kaplan-Meier estimates of survival show that Jackson mice cohoused with Charles River mice for 7 days do not demonstrate protection against lung fibrosis and have similar increased mortality compared with Jackson mice that were not cohoused with Charles River. (C) PCA and ordination of 16S data after 7 days of cohousing. Community composition has shifted, but C57BL/6J cohoused mice remain significantly different by PERMANOVA from others. (D) Similar levels of lung collagen content in Jackson mice and Jackson mice cohoused with Charles River mice. (E) Equal number of identifiable taxa in both Jackson cohorts. (F) Study design: to understand the potential impact of intranasal antibiotics on gut microbiota, we gave intranasal antibiotics to C57BL/6J mice and then examined gut microbiota composition by 16S rRNA amplicon sequencing over 7 days. (G) Control mice receiving intranasal sterile saline did not demonstrate significant changes in gut microbial community composition over time (PERMANOVA P > 0.05). (H) PCA and ordination of 16S data from mice receiving intranasal antibiotics demonstrate a significant separation of community composition by day 7 (PERMANOVA P < 0.001). (n = 8–10 per group.) PERMANOVA (C, G, and H), log rank test (B), unpaired t test or Mann-Whitney test (D and E) where applicable. *P < 0.05, **P < 0.01, ****P < 0.0001.

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