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The shifting lipidomic landscape of blood monocytes and neutrophils during pneumonia
Alex R. Schuurman, Osoul Chouchane, Joe M. Butler, Hessel Peters-Sengers, Sebastiaan Joosten, Xanthe Brands, Bastiaan W. Haak, Natasja A. Otto, Fabrice Uhel, Augustijn Klarenbeek, Christine C.A. van Linge, Antoine van Kampen, Mia Pras-Raves, Michel van Weeghel, Marco van Eijk, Maria J. Ferraz, Daniël R. Faber, Alex de Vos, Brendon P. Scicluna, Frédéric M. Vaz, W. Joost Wiersinga, Tom van der Poll
Alex R. Schuurman, Osoul Chouchane, Joe M. Butler, Hessel Peters-Sengers, Sebastiaan Joosten, Xanthe Brands, Bastiaan W. Haak, Natasja A. Otto, Fabrice Uhel, Augustijn Klarenbeek, Christine C.A. van Linge, Antoine van Kampen, Mia Pras-Raves, Michel van Weeghel, Marco van Eijk, Maria J. Ferraz, Daniël R. Faber, Alex de Vos, Brendon P. Scicluna, Frédéric M. Vaz, W. Joost Wiersinga, Tom van der Poll
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Research Article Immunology Infectious disease

The shifting lipidomic landscape of blood monocytes and neutrophils during pneumonia

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Abstract

The lipidome of immune cells during infection has remained unexplored, although evidence of the importance of lipids in the context of immunity is mounting. In this study, we performed untargeted lipidomic analysis of blood monocytes and neutrophils from patients hospitalized for pneumonia and age- and sex-matched noninfectious control volunteers. We annotated 521 and 706 lipids in monocytes and neutrophils, respectively, which were normalized to an extensive set of internal standards per lipid class. The cellular lipidomes were profoundly altered in patients, with both common and distinct changes between the cell types. Changes involved every level of the cellular lipidome: differential lipid species, class-wide shifts, and altered saturation patterns. Overall, differential lipids were mainly less abundant in monocytes and more abundant in neutrophils from patients. One month after hospital admission, lipidomic changes were fully resolved in monocytes and partially in neutrophils. Integration of lipidomic and concurrently collected transcriptomic data highlighted altered sphingolipid metabolism in both cell types. Inhibition of ceramide and sphingosine-1-phosphate synthesis in healthy monocytes and neutrophils resulted in blunted cytokine responses upon stimulation with lipopolysaccharide. These data reveal major lipidomic remodeling in immune cells during infection, and link the cellular lipidome to immune functionality.

Authors

Alex R. Schuurman, Osoul Chouchane, Joe M. Butler, Hessel Peters-Sengers, Sebastiaan Joosten, Xanthe Brands, Bastiaan W. Haak, Natasja A. Otto, Fabrice Uhel, Augustijn Klarenbeek, Christine C.A. van Linge, Antoine van Kampen, Mia Pras-Raves, Michel van Weeghel, Marco van Eijk, Maria J. Ferraz, Daniël R. Faber, Alex de Vos, Brendon P. Scicluna, Frédéric M. Vaz, W. Joost Wiersinga, Tom van der Poll

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Figure 1

The lipidomes of monocytes and neutrophils are distinctly altered during pneumonia.

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The lipidomes of monocytes and neutrophils are distinctly altered during...
(A) Study overview. (B) Principal Component Analysis (PCA) and volcano plot comparing the monocyte lipidome between patients with CAP and matched noninfectious controls. In the PCA plot, each dot represents a participant and the color represents the group. The x and y axes show the first and PC with the percentage of explained variance, respectively. Difference between groups on the PCA plot was tested by Wilcoxon’s rank-sum test of the first PC coordinates. The volcano plot shows the differential abundance of lipids between patients with CAP and controls. Each dot represents a lipid species, while the color indicates whether the lipid is significantly more abundant (red), significantly less abundant (blue), or not significantly altered (gray). The x axis denotes the log2(fold change) between groups, while the y axis shows the Benjamini-Hochberg–adjusted –log10(P value). The pie chart represents the whole lipidome and gives an indication of what percentage of lipids is more abundant, less abundant, or unchanged. (C) Identical to panel A, but here for CAP recovery monocytes versus control monocytes. (D) Identical to panel B, but here for neutrophils. (E) Identical to panel C, but here for neutrophils.

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