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Metastatic pancreatic neuroendocrine tumors feature elevated T cell infiltration
Jacques Greenberg, Jessica Limberg, Akanksha Verma, David Kim, Xiang Chen, Yeon J. Lee, Maureen D. Moore, Timothy M. Ullmann, Jessica W. Thiesmeyer, Zachary Loewenstein, Kevin J. Chen, Caitlin E. Egan, Dessislava Stefanova, Rohan Bareja, Rasa Zarnegar, Brendan M. Finnerty, Theresa Scognamiglio, Yi-Chieh Nancy Du, Olivier Elemento, Thomas J. Fahey III, Irene M. Min
Jacques Greenberg, Jessica Limberg, Akanksha Verma, David Kim, Xiang Chen, Yeon J. Lee, Maureen D. Moore, Timothy M. Ullmann, Jessica W. Thiesmeyer, Zachary Loewenstein, Kevin J. Chen, Caitlin E. Egan, Dessislava Stefanova, Rohan Bareja, Rasa Zarnegar, Brendan M. Finnerty, Theresa Scognamiglio, Yi-Chieh Nancy Du, Olivier Elemento, Thomas J. Fahey III, Irene M. Min
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Research Article Immunology Therapeutics

Metastatic pancreatic neuroendocrine tumors feature elevated T cell infiltration

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Abstract

Pancreatic neuroendocrine tumors (PNETs) are malignancies arising from the islets of Langerhans. Therapeutic options are limited for the over 50% of patients who present with metastatic disease. We aimed to identify mechanisms to remodel the PNET tumor microenvironment (TME) to ultimately enhance susceptibility to immunotherapy. The TMEs of localized and metastatic PNETs were investigated using an approach that combines RNA-Seq, cancer and T cell profiling, and pharmacologic perturbations. RNA-Seq analysis indicated that the primary tumors of metastatic PNETs showed significant activation of inflammatory and immune-related pathways. We determined that metastatic PNETs featured increased numbers of tumor-infiltrating T cells compared with localized tumors. T cells isolated from both localized and metastatic PNETs showed evidence of recruitment and antigen-dependent activation, suggestive of an immune-permissive microenvironment. A computational analysis suggested that vorinostat, a histone deacetylase inhibitor, may perturb the transcriptomic signature of metastatic PNETs. Treatment of PNET cell lines with vorinostat increased chemokine CCR5 expression by NF-κB activation. Vorinostat treatment of patient-derived metastatic PNET tissues augmented recruitment of autologous T cells, and this augmentation was substantiated in a mouse model of PNET. Pharmacologic induction of chemokine expression may represent a promising approach for enhancing the immunogenicity of metastatic PNET TMEs.

Authors

Jacques Greenberg, Jessica Limberg, Akanksha Verma, David Kim, Xiang Chen, Yeon J. Lee, Maureen D. Moore, Timothy M. Ullmann, Jessica W. Thiesmeyer, Zachary Loewenstein, Kevin J. Chen, Caitlin E. Egan, Dessislava Stefanova, Rohan Bareja, Rasa Zarnegar, Brendan M. Finnerty, Theresa Scognamiglio, Yi-Chieh Nancy Du, Olivier Elemento, Thomas J. Fahey III, Irene M. Min

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Figure 1

Schematic diagram of bioinformatic analysis of this study.

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Schematic diagram of bioinformatic analysis of this study.
(A) Tissue wa...
(A) Tissue was collected from the primary tumors of 22 patients with PNETs for RNA-Seq in Cohort 1. Gene expression was compared between metastatic and localized tumors to derive a metastatic expression profile. Principal component analysis (PCA), Hallmark pathway, and ESTIMATE ImmuneScore analyses were performed. A list of therapeutic drugs was generated based on the differential expression profiles between metastatic and localized tumors, and a candidate drug was examined for its effect on PNET cell lines and patient tissues. IHC was performed in 12 patients from Cohort 1 along with Cohort 2. Flow cytometry analysis in Cohort 3 was performed with additional tumors and blood samples. (B) Progression-free survival curves generated for patients with metastatic and localized disease (Cohort 1 in A). Progression-free survival was greater for patients with localized PNETs compared with those with metastatic PNETs (P = 0.047, Gehan-Breslow-Wilcoxon test). The median progression-free survival for those with localized disease was 89.5 months, whereas it was 48 months for metastatic disease.

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ISSN 2379-3708

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