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microRNA-33 deficiency in macrophages enhances autophagy, improves mitochondrial homeostasis, and protects against lung fibrosis
Farida Ahangari, … , Carlos Fernández-Hernando, Naftali Kaminski
Farida Ahangari, … , Carlos Fernández-Hernando, Naftali Kaminski
Published January 10, 2023
Citation Information: JCI Insight. 2023;8(4):e158100. https://doi.org/10.1172/jci.insight.158100.
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Research Article Metabolism Pulmonology

microRNA-33 deficiency in macrophages enhances autophagy, improves mitochondrial homeostasis, and protects against lung fibrosis

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Abstract

Idiopathic pulmonary fibrosis (IPF) is a progressive and ultimately fatal disease. Recent findings have shown a marked metabolic reprogramming associated with changes in mitochondrial homeostasis and autophagy during pulmonary fibrosis. The microRNA-33 (miR-33) family of microRNAs (miRNAs) encoded within the introns of sterol regulatory element binding protein (SREBP) genes are master regulators of sterol and fatty acid (FA) metabolism. miR-33 controls macrophage immunometabolic response and enhances mitochondrial biogenesis, FA oxidation, and cholesterol efflux. Here, we show that miR-33 levels are increased in bronchoalveolar lavage (BAL) cells isolated from patients with IPF compared with healthy controls. We demonstrate that specific genetic ablation of miR-33 in macrophages protects against bleomycin-induced pulmonary fibrosis. The absence of miR-33 in macrophages improves mitochondrial homeostasis and increases autophagy while decreasing inflammatory response after bleomycin injury. Notably, pharmacological inhibition of miR-33 in macrophages via administration of anti–miR-33 peptide nucleic acids (PNA-33) attenuates fibrosis in different in vivo and ex vivo mice and human models of pulmonary fibrosis. These studies elucidate a major role of miR-33 in macrophages in the regulation of pulmonary fibrosis and uncover a potentially novel therapeutic approach to treat this disease.

Authors

Farida Ahangari, Nathan L. Price, Shipra Malik, Maurizio Chioccioli, Thomas Bärnthaler, Taylor S. Adams, Jooyoung Kim, Sai Pallavi Pradeep, Shuizi Ding, Carlos Cosmos Jr., Kadi-Ann S. Rose, John E. McDonough, Nachelle R. Aurelien, Gabriel Ibarra, Norihito Omote, Jonas C. Schupp, Giuseppe DeIuliis, Julian A. Villalba Nunez, Lokesh Sharma, Changwan Ryu, Charles S. Dela Cruz, Xinran Liu, Antje Prasse, Ivan Rosas, Raman Bahal, Carlos Fernández-Hernando, Naftali Kaminski

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Figure 2

Loss of miR-33 in myeloid cells is protective against bleomycin-induced lung fibrosis and increases mitochondrial-related target gene expression.

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Loss of miR-33 in myeloid cells is protective against bleomycin-induced ...
Evaluation of bleomycin-induced lung fibrosis in myeloid-specific miR-33–KO mice (miR33M/M–/–) versus controls (miR33M/M+/+) in bleomycin (red) compared with saline (blue) n = 8 for saline and n = 16 for bleomycin groups. (A) miR-33 relative expression by qPCR analysis in AM isolated from miR33M/M–/– versus controls miR33M/M+/+. (B) Quantitative analysis of hydroxyproline in lung homogenates from indicated groups of mice. (C and D) Acta2 and Col1a1 relative gene expression by qPCR analysis in mice lungs from indicated groups. (E and F) Representative images and quantitative measurements of Masson’s trichrome staining of lung sections in miR33M/M–/– versus controls miR33M/M+/+ with saline and bleomycin. (G) Differential cell counts in BAL were harvested from indicated groups. (H–O) BAL cytokines inflammatory panel in indicated groups: (H) TNF-α, (I) IL-12p70, (J) IL-2, (K) INF-γ, (L) KC-GRO, (M) IL-1β, (N) IL-13, and (O) IL-4. (P–T) qPCR analysis of mitochondrial-related miR-33 target genes: (P) Pgc-1α, (Q) Crot, (R) Abca1, (S) Cpt1α, and (T) Sirt3 in miR33M/M–/– versus controls miR33M/M+/+ with saline and bleomycin. All data were analyzed by ANOVA or Kruskal-Wallis tests, followed by post hoc analysis, and are presented as mean ± SEM. *P ≤ 0.05, **P < 0.01, ***P < 0.001. Total original magnification, 4×.

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