Go to The Journal of Clinical Investigation
  • About
  • Editors
  • Consulting Editors
  • For authors
  • Publication ethics
  • Publication alerts by email
  • Transfers
  • Advertising
  • Job board
  • Contact
  • Physician-Scientist Development
  • Current issue
  • Past issues
  • By specialty
    • COVID-19
    • Cardiology
    • Immunology
    • Metabolism
    • Nephrology
    • Oncology
    • Pulmonology
    • All ...
  • Videos
  • Collections
    • In-Press Preview
    • Resource and Technical Advances
    • Clinical Research and Public Health
    • Research Letters
    • Editorials
    • Perspectives
    • Physician-Scientist Development
    • Reviews
    • Top read articles

  • Current issue
  • Past issues
  • Specialties
  • In-Press Preview
  • Resource and Technical Advances
  • Clinical Research and Public Health
  • Research Letters
  • Editorials
  • Perspectives
  • Physician-Scientist Development
  • Reviews
  • Top read articles
  • About
  • Editors
  • Consulting Editors
  • For authors
  • Publication ethics
  • Publication alerts by email
  • Transfers
  • Advertising
  • Job board
  • Contact
Tissue-localized immune responses in people with cystic fibrosis and respiratory nontuberculous mycobacteria infection
Don Hayes Jr., Rajni Kant Shukla, Yizi Cheng, Emrah Gecili, Marlena R. Merling, Rhonda D. Szczesniak, Assem G. Ziady, Jason C. Woods, Luanne Hall-Stoodley, Namal P.M. Liyanage, Richard T. Robinson
Don Hayes Jr., Rajni Kant Shukla, Yizi Cheng, Emrah Gecili, Marlena R. Merling, Rhonda D. Szczesniak, Assem G. Ziady, Jason C. Woods, Luanne Hall-Stoodley, Namal P.M. Liyanage, Richard T. Robinson
View: Text | PDF
Research Article Infectious disease Pulmonology

Tissue-localized immune responses in people with cystic fibrosis and respiratory nontuberculous mycobacteria infection

  • Text
  • PDF
Abstract

Nontuberculous mycobacteria (NTM) are an increasingly common cause of respiratory infection in people with cystic fibrosis (PwCF). Relative to those with no history of NTM infection (CF-NTMNEG), PwCF and a history of NTM infection (CF-NTMPOS) are more likely to develop severe lung disease and experience complications over the course of treatment. In other mycobacterial infections (e.g., tuberculosis), an overexuberant immune response causes pathology and compromises organ function; however, since the immune profiles of CF-NTMPOS and CF-NTMNEG airways are largely unexplored, it is unknown which, if any, immune responses distinguish these cohorts or concentrate in damaged tissues. Here, we evaluated lung lobe–specific immune profiles of 3 cohorts (CF-NTMPOS, CF-NTMNEG, and non-CF adults) and found that CF-NTMPOS airways are distinguished by a hyperinflammatory cytokine profile. Importantly, the CF-NTMPOS airway immune profile was dominated by B cells, classical macrophages, and the cytokines that support their accumulation. These and other immunological differences between cohorts, including the near absence of NK cells and complement pathway members, were enriched in the most damaged lung lobes. The implications of these findings for our understanding of lung disease in PwCF are discussed, as are how they may inform the development of host-directed therapies to improve NTM disease treatment.

Authors

Don Hayes Jr., Rajni Kant Shukla, Yizi Cheng, Emrah Gecili, Marlena R. Merling, Rhonda D. Szczesniak, Assem G. Ziady, Jason C. Woods, Luanne Hall-Stoodley, Namal P.M. Liyanage, Richard T. Robinson

×

Figure 1

Overview of our study and experimental design.

Options: View larger image (or click on image) Download as PowerPoint
Overview of our study and experimental design.
Adult individuals with CF...
Adult individuals with CF and a history of being CF-NTMPOS and CF-NTMNEG consented to our study after having scheduled a clinically indicated CT scan and bronchoscopy. CTRL individuals likewise consented to a research bronchoscopy. All bronchoscopies were done by the same individual (author DH). At the time of the bronchoscopy, blood- and lobe-specific BALF samples from the RUL, RML, RLL, LUL, Ling, and LLL were collected and kept separate. Once BALF samples were centrifuged and otherwise processed in a laboratory, cell-free supernatants from each lobe were collected and frozen for downstream cytokine measurements (the data from which are shown in Figures 5 and 6). To have a sufficient number of cells for flow cytometry, cell pellets from the right lung lobes (RUL, RML, and RLL) were pooled, as were the cell pellets from the left lung lobes (LUL, Ling, and LLL). The right lung BALF cells, left lung BALF cells, and PBMCs of each individual were immediately used for phenotypic and functional flow cytometry analysis (the data from which are shown in Figures 2–4, and 7).

Copyright © 2026 American Society for Clinical Investigation
ISSN 2379-3708

Sign up for email alerts