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ATR represents a therapeutic vulnerability in clear cell renal cell carcinoma
Philipp Seidel, Anne Rubarth, Kyra Zodel, Asin Peighambari, Felix Neumann, Yannick Federkiel, Hsin Huang, Rouven Hoefflin, Mojca Adlesic, Christian Witt, David J. Hoffmann, Patrick Metzger, Ralph K. Lindemann, Frank T. Zenke, Christoph Schell, Melanie Boerries, Dominik von Elverfeldt, Wilfried Reichardt, Marie Follo, Joachim Albers, Ian J. Frew
Philipp Seidel, Anne Rubarth, Kyra Zodel, Asin Peighambari, Felix Neumann, Yannick Federkiel, Hsin Huang, Rouven Hoefflin, Mojca Adlesic, Christian Witt, David J. Hoffmann, Patrick Metzger, Ralph K. Lindemann, Frank T. Zenke, Christoph Schell, Melanie Boerries, Dominik von Elverfeldt, Wilfried Reichardt, Marie Follo, Joachim Albers, Ian J. Frew
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Research Article Oncology

ATR represents a therapeutic vulnerability in clear cell renal cell carcinoma

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Abstract

Metastatic clear cell renal cell carcinomas (ccRCCs) are resistant to DNA-damaging chemotherapies, limiting therapeutic options for patients whose tumors are resistant to tyrosine kinase inhibitors and/or immune checkpoint therapies. Here we show that mouse and human ccRCCs were frequently characterized by high levels of endogenous DNA damage and that cultured ccRCC cells exhibited intact cellular responses to chemotherapy-induced DNA damage. We identify that pharmacological inhibition of the DNA damage–sensing kinase ataxia telangiectasia and Rad3-related protein (ATR) with the orally administered, potent, and selective drug M4344 (gartisertib) induced antiproliferative effects in ccRCC cells. This effect was due to replication stress and accumulation of DNA damage in S phase. In some cells, DNA damage persisted into subsequent G2/M and G1 phases, leading to the frequent accumulation of micronuclei. Daily single-agent treatment with M4344 inhibited the growth of ccRCC xenograft tumors. M4344 synergized with chemotherapeutic drugs including cisplatin and carboplatin and the poly(ADP-ribose) polymerase inhibitor olaparib in mouse and human ccRCC cells. Weekly M4344 plus cisplatin treatment showed therapeutic synergy in ccRCC xenografts and was efficacious in an autochthonous mouse ccRCC model. These studies identify ATR inhibition as a potential novel therapeutic option for ccRCC.

Authors

Philipp Seidel, Anne Rubarth, Kyra Zodel, Asin Peighambari, Felix Neumann, Yannick Federkiel, Hsin Huang, Rouven Hoefflin, Mojca Adlesic, Christian Witt, David J. Hoffmann, Patrick Metzger, Ralph K. Lindemann, Frank T. Zenke, Christoph Schell, Melanie Boerries, Dominik von Elverfeldt, Wilfried Reichardt, Marie Follo, Joachim Albers, Ian J. Frew

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Figure 8

In vivo therapeutic efficacy of M4344 plus cisplatin in the Vhl/Trp53/Rb1 mutant autochthonous ccRCC mouse model.

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In vivo therapeutic efficacy of M4344 plus cisplatin in the Vhl/Trp53/Rb...
(A) Representative MRI time course of ccRCC tumors (encircled) in an untreated mouse and 3 mice treated with weekly doses of cisplatin (2.5 mg/kg) followed by M4344 (10 mg/kg) 18 hours later. Days after therapy induction and tumor volumes are shown. (B and C) Relative Vhl/Trp53/Rb1 mutant ccRCC tumor volume change over time in control mice (B) and M4344 + cisplatin–treated mice (C). Each line represents an individual tumor; volume changes were cut off at 5,000% for representation purposes. (D) Quantification of percentage of positively stained nuclei for γ-H2AX in tumors from C that showed continuous growth or that showed volume shrinkage as best response. Tumors were harvested 2 days after the final M4344 treatment. Tumors from C are identified in D by the corresponding symbol. Two-sided P value was calculated by Student’s paired t test, *P < 0.05. (E) Flow cytometric quantification of the cellular composition of the tumor immune microenvironment in control (n = 7–13) and M4344 + cisplatin–treated (n = 4) mice. Tumors were harvested 2 days after the final M4344 treatment. Data depict mean ± std. dev. P values were calculated using the 2-stage linear step-up procedure of Benjamini, Krieger, and Yekutieli, q = 1%, without assuming a consistent std. dev. between groups. ****P < 0.0001.

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