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Prdm6 controls heart development by regulating neural crest cell differentiation and migration
Lingjuan Hong, … , David van Dijk, Arya Mani
Lingjuan Hong, … , David van Dijk, Arya Mani
Published February 2, 2022
Citation Information: JCI Insight. 2022;7(4):e156046. https://doi.org/10.1172/jci.insight.156046.
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Research Article Cardiology Development

Prdm6 controls heart development by regulating neural crest cell differentiation and migration

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Abstract

The molecular mechanisms that drive the acquisition of distinct neural crest cell (NCC) fates is still poorly understood. Here, we identified Prdm6 as an epigenetic modifier that temporally and spatially regulates the expression of NCC specifiers and determines the fate of a subset of migrating cardiac NCCs (CNCCs). Using transcriptomic analysis and genetic and fate mapping approaches in transgenic mice, we showed that disruption of Prdm6 was associated with impaired CNCC differentiation, delamination, and migration and led to patent ductus arteriosus (DA) and ventricular noncompaction. Bulk and single-cell RNA-Seq analyses of the DA and CNCCs identified Prdm6 as a regulator of a network of CNCC specification genes, including Wnt1, Tfap2b, and Sox9. Loss of Prdm6 in CNCCs diminished its expression in the pre-epithelial–mesenchymal transition (pre-EMT) cluster, resulting in the retention of NCCs in the dorsal neural tube. This defect was associated with diminished H4K20 monomethylation and G1-S progression and augmented Wnt1 transcript levels in pre-EMT and neural tube clusters, which we showed was the major driver of the impaired CNCC migration. Altogether, these findings revealed Prdm6 as a key regulator of CNCC differentiation and migration and identified Prdm6 and its regulated network as potential targets for the treatment of congenital heart diseases.

Authors

Lingjuan Hong, Na Li, Victor Gasque, Sameet Mehta, Lupeng Ye, Yinyu Wu, Jinyu Li, Andreas Gewies, Jürgen Ruland, Karen K. Hirschi, Anne Eichmann, Caroline Hendry, David van Dijk, Arya Mani

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Figure 4

Single-cell RNA-Seq of the cardiac neural crest region.

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Single-cell RNA-Seq of the cardiac neural crest region.
(A) Schematic of...
(A) Schematic of neural crest segments shown in different colors (top). The segment excised for single-cell RNA-Seq of CNCCs of E9.5 embryo (bottom). (B) PHATE embeddings of Wnt1-specific KO Prdm6 mice and the corresponding littermates. (C) The t-SNE plots of selected clusters of Wnt1-specific KO Prdm6 mice and the corresponding littermates generated by Partek flow. Each dot represents a cell (https://www.partek.com/partek-flow/). (D) The t-SNE plots displaying the expression levels of Prdm6 in each cluster represented by dot sizes. The insets represent the magnification of pre-EMT (blue); cardiac muscle lineage (yellow) clusters marked by lines (n = 3 per group).

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