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A single-cell atlas of the myometrium in human parturition
Roger Pique-Regi, Roberto Romero, Valeria Garcia-Flores, Azam Peyvandipour, Adi L. Tarca, Errile Pusod, Jose Galaz, Derek Miller, Gaurav Bhatti, Robert Para, Tomi Kanninen, Ola Hadaya, Carmen Paredes, Kenichiro Motomura, Jeffrey R. Johnson, Eunjung Jung, Chaur-Dong Hsu, Stanley M. Berry, Nardhy Gomez-Lopez
Roger Pique-Regi, Roberto Romero, Valeria Garcia-Flores, Azam Peyvandipour, Adi L. Tarca, Errile Pusod, Jose Galaz, Derek Miller, Gaurav Bhatti, Robert Para, Tomi Kanninen, Ola Hadaya, Carmen Paredes, Kenichiro Motomura, Jeffrey R. Johnson, Eunjung Jung, Chaur-Dong Hsu, Stanley M. Berry, Nardhy Gomez-Lopez
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Research Article Cell biology Reproductive biology

A single-cell atlas of the myometrium in human parturition

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Abstract

Parturition is a well-orchestrated process characterized by increased uterine contractility, cervical ripening, and activation of the chorioamniotic membranes; yet, the transition from a quiescent to a contractile myometrium heralds the onset of labor. However, the cellular underpinnings of human parturition in the uterine tissues are still poorly understood. Herein, we performed a comprehensive study of the human myometrium during spontaneous term labor using single-cell RNA sequencing (scRNA-Seq). First, we established a single-cell atlas of the human myometrium and unraveled the cell type–specific transcriptomic activity modulated during labor. Major cell types included distinct subsets of smooth muscle cells, monocytes/macrophages, stromal cells, and endothelial cells, all of which communicated and participated in immune (e.g., inflammation) and nonimmune (e.g., contraction) processes associated with labor. Furthermore, integrating scRNA-Seq and microarray data with deconvolution of bulk gene expression highlighted the contribution of smooth muscle cells to labor-associated contractility and inflammatory processes. Last, myometrium-derived single-cell signatures can be quantified in the maternal whole-blood transcriptome throughout pregnancy and are enriched in women in labor, providing a potential means of noninvasively monitoring pregnancy and its complications. Together, our findings provide insights into the contributions of specific myometrial cell types to the biological processes that take place during term parturition.

Authors

Roger Pique-Regi, Roberto Romero, Valeria Garcia-Flores, Azam Peyvandipour, Adi L. Tarca, Errile Pusod, Jose Galaz, Derek Miller, Gaurav Bhatti, Robert Para, Tomi Kanninen, Ola Hadaya, Carmen Paredes, Kenichiro Motomura, Jeffrey R. Johnson, Eunjung Jung, Chaur-Dong Hsu, Stanley M. Berry, Nardhy Gomez-Lopez

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Figure 10

Comparative analysis of the single-cell transcriptomic profile of myometrial tissues and the bulk transcriptomic profile of maternal peripheral blood at term in labor versus term not in labor.

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Comparative analysis of the single-cell transcriptomic profile of myomet...
(A) Diagram illustrating the comparative analysis of myometrial tissues collected from women at term in labor (n = 11) and not in labor (n = 13) using scRNA-Seq compared with maternal peripheral blood collected from women at term in labor (n = 21) and not in labor (n = 28) using bulk transcriptomics from a previously reported data set (Gomez-Lopez et al. 2021) (94). (B) GSEA plot showing enrichment scores using the ranked list of differentially expressed genes (DEGs) comparing women at term in labor and not in labor from maternal peripheral blood and cell type annotations of labor-associated DEGs analyzed from myometrial tissues. A 1-sided Kolmogorov-Smirnov test was used. (C) ClusterProfiler dot plot showing gene enrichment in selected cell types, where the size and color of the dots represent enrichment score and significance level, respectively. A 1-sided Kolmogorov-Smirnov test was used. (D) Scatter plot showing labor fold changes detected as differentially expressed in myometrial monocytes (x axis) that were also detected in peripheral blood (y axis). A 2-sided Spearman’s correlation test was performed. (E) Forest plot showing cell type–specific association to the labor process for ERRFI1. Each dot represents the log2(fold change) when comparing term in labor and term not in labor groups, and the bars represent the 95% confidence interval. ILC, innate lymphoid cell; LED, lymphoid endothelial decidual cell; NK cell, natural killer cell; SMC, smooth muscle cell.

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ISSN 2379-3708

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