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Cell stress response impairs de novo NAD+ biosynthesis in the kidney
Yohan Bignon, Anna Rinaldi, Zahia Nadour, Virginie Poindessous, Ivan Nemazanyy, Olivia Lenoir, Baptiste Fohlen, Pierre Weill-Raynal, Alexandre Hertig, Alexandre Karras, Pierre Galichon, Maarten Naesens, Dany Anglicheau, Pietro E. Cippà, Nicolas Pallet
Yohan Bignon, Anna Rinaldi, Zahia Nadour, Virginie Poindessous, Ivan Nemazanyy, Olivia Lenoir, Baptiste Fohlen, Pierre Weill-Raynal, Alexandre Hertig, Alexandre Karras, Pierre Galichon, Maarten Naesens, Dany Anglicheau, Pietro E. Cippà, Nicolas Pallet
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Research Article Metabolism Nephrology

Cell stress response impairs de novo NAD+ biosynthesis in the kidney

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Abstract

The biosynthetic routes leading to de novo nicotinamide adenine dinucleotide (NAD+) production are involved in acute kidney injury (AKI), with a critical role for quinolinate phosphoribosyl transferase (QPRT), a bottleneck enzyme of de novo NAD+ biosynthesis. The molecular mechanisms determining reduced QPRT in AKI, and the role of impaired NAD+ biosynthesis in the progression to chronic kidney disease (CKD), are unknown. We demonstrate that a high urinary quinolinate-to-tryptophan ratio, an indirect indicator of impaired QPRT activity and reduced de novo NAD+ biosynthesis in the kidney, is a clinically applicable early marker of AKI after cardiac surgery and is predictive of progression to CKD in kidney transplant recipients. We also provide evidence that the endoplasmic reticulum (ER) stress response may impair de novo NAD+ biosynthesis by repressing QPRT transcription. In conclusion, NAD+ biosynthesis impairment is an early event in AKI embedded with the ER stress response, and persistent reduction of QPRT expression is associated with AKI to CKD progression. This finding may lead to identification of noninvasive metabolic biomarkers of kidney injury with prognostic and therapeutic implications.

Authors

Yohan Bignon, Anna Rinaldi, Zahia Nadour, Virginie Poindessous, Ivan Nemazanyy, Olivia Lenoir, Baptiste Fohlen, Pierre Weill-Raynal, Alexandre Hertig, Alexandre Karras, Pierre Galichon, Maarten Naesens, Dany Anglicheau, Pietro E. Cippà, Nicolas Pallet

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Figure 4

QPRT expression is repressed in response to kidney injuries associated with ER stress.

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QPRT expression is repressed in response to kidney injuries associated w...
(A) Expression of Ddit3 and Qprt transcripts by quantitative PCR (qPCR) in the kidney cortex of mice 48 hours after intraperitoneal injection of 1 mg/kg Tun or DMSO (n = 4 to 5 mice per condition). Bars represent mean ± SEM. P values were computed with Student’s t test. (B) Expression of Ddit3 and Qprt transcripts by RNA-Seq in whole kidneys of 12- and 24-week-old UmodC147W/+ mice and wild-type mice (5 to 10 mice per condition). Data are from public repositories (National Center for Biotechnology Information Gene Expression Omnibus [NCBI GEO] accession GSE102566). Bars represent mean ± SEM. P values were computed with Student’s t test. (C) Expression of Ddit3 and Qprt transcripts by qPCR in the kidney cortex of diabetic mice. Bars represent mean ± SEM. P values were computed with Student’s t test. (D) Uniform manifold approximation and projections (UMAPs) of 7 mouse IRI and 8 control kidney samples analyzed by snRNA-Seq (n = 19,926 cells) identify segments of the proximal tubule (S1, S2, S3) and new (injured) proximal tubule clusters (PT1, PT2, PT3). (E) UMAPs of 7 mouse IRI and 8 control kidney samples analyzed by snRNA-Seq (n = 19,926 cells) identify the expression of differentiation markers (Lrp2, Slc5a12, and Slc16a9) and injury marker (Havcr1) in segments of the proximal tubule (S1, S2, S3) and new proximal tubule clusters (PT1, PT2, PT3) (F) (Left) UMAPs of 7 mouse IRI and 8 control kidney samples analyzed by snRNA-Seq (n = 19,926 cells) highlighting uninjured (blue) and injured PTC (red) populations. (Right) UMAPs of 7 mouse IRI and 8 control kidney samples analyzed by snRNA-Seq (n = 19,926 cells) identify the differential expression of Qprt in injured and noninjured PTCs. (G) Expression of classical differentiation and injury markers over time after IRI in 7 mouse IRI and 8 control kidney samples analyzed by snRNA-Seq. Each column represents the average expression per cell state in control PTCs and injured PTCs at 4 hours and 12 hours. (n = 15 samples, n = 19,164 cells.)

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