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Biallelic TET2 mutations confer sensitivity to 5′-azacitidine in acute myeloid leukemia
Friedrich Stölzel, … , Martin Bornhäuser, James M. Allan
Friedrich Stölzel, … , Martin Bornhäuser, James M. Allan
Published December 8, 2022
Citation Information: JCI Insight. 2023;8(2):e150368. https://doi.org/10.1172/jci.insight.150368.
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Research Article Hematology

Biallelic TET2 mutations confer sensitivity to 5′-azacitidine in acute myeloid leukemia

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Abstract

Precision medicine can significantly improve outcomes for patients with cancer, but implementation requires comprehensive characterization of tumor cells to identify therapeutically exploitable vulnerabilities. Here, we describe somatic biallelic TET2 mutations in an elderly patient with acute myeloid leukemia (AML) that was chemoresistant to anthracycline and cytarabine but acutely sensitive to 5′-azacitidine (5′-Aza) hypomethylating monotherapy, resulting in long-term morphological remission. Given the role of TET2 as a regulator of genomic methylation, we hypothesized that mutant TET2 allele dosage affects response to 5′-Aza. Using an isogenic cell model system and an orthotopic mouse xenograft, we demonstrate that biallelic TET2 mutations confer sensitivity to 5′-Aza compared with cells with monoallelic mutations. Our data argue in favor of using hypomethylating agents for chemoresistant disease or as first-line therapy in patients with biallelic TET2-mutated AML and demonstrate the importance of considering mutant allele dosage in the implementation of precision medicine for patients with cancer.

Authors

Friedrich Stölzel, Sarah E. Fordham, Devi Nandana, Wei-Yu Lin, Helen Blair, Claire Elstob, Hayden L. Bell, Brigitte Mohr, Leo Ruhnke, Desiree Kunadt, Claudia Dill, Daniel Allsop, Rachel Piddock, Emmanouela-Niki Soura, Catherine Park, Mohd Fadly, Thahira Rahman, Abrar Alharbi, Manja Wobus, Heidi Altmann, Christoph Röllig, Lisa Wagenführ, Gail L. Jones, Tobias Menne, Graham H. Jackson, Helen J. Marr, Jude Fitzgibbon, Kenan Onel, Manja Meggendorfer, Amber Robinson, Zuzanna Bziuk, Emily Bowes, Olaf Heidenreich, Torsten Haferlach, Sara Villar, Beñat Ariceta, Rosa Ayala Diaz, Steven J. Altschuler, Lani F. Wu, Felipe Prosper, Pau Montesinos, Joaquin Martinez-Lopez, Martin Bornhäuser, James M. Allan

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Figure 1

Biallelic TET2 mutation in a patient with 5′-azacitidine–sensitive AML.

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Biallelic TET2 mutation in a patient with 5′-azacitidine–sensitive AML.
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(A) Identification of the t(4;12) translocation by G-banding (top) and spectral karyotyping (bottom) in leukemic blasts from the AML index patient (UPN01). Translocated chromosomes 4 and 12 are indicated with arrows. (B) Hemoglobin, platelet, and white blood cell (WBC) counts from diagnosis to relapse of UPN01. Gray shading indicates period of induction chemotherapy with daunorubicin and Ara-C (DA). Initiations of palliative 5′-Aza treatment cycles are indicated with arrows. Gpt, giga-particles. (C) Giemsa-stained BM smears at day 30 (left) (after failed induction chemotherapy) and day 180 (right) (during 5′-Aza–induced remission) in UPN01. Images are 500× original magnification. (D) High-density array copy number profiles of chromosome 4 from leukemic blasts of UPN01 at AML presentation, during CR, and at relapse. Points represent individual SNPs, aligned relative to their position on chromosome 4 (indicated by the ideogram). Copy number is measured as log R ratio, with 0 indicating diploid SNPs and positive and negative values indicating gain and loss, respectively. B allele frequency represents the ratio of the 2 alleles of each SNP such that 0.5 indicates allele heterozygosity and 0 and 1 indicate homozygosity. Inset shows expanded view of the boxed region. Green bar above plots highlights focal deletion within 4q24 encompassing TET2, CXCC4, and PPA2 (locations indicated by bars below plots). (E) FISH on leukemic blasts from UPN01 showing TET2 (shown in red) deletion in a metaphase cell (left of image) and 2 interphase cells (right of image). A probe binding within 4q12 (green) was used as reference. Original magnification, ×600. (F) Fish plot derived from sequencing analysis of leukemic blasts from UPN01 showing temporal acquisition of a TET2 point mutation, a TET2 deletion, an NPM1 insertion mutation, and a FLT3 internal tandem duplication (ITD). Dashed lines represent time points at which blasts were analyzed. 5′-Aza, 5′-azacitidine; PRES, disease presentation; CR, complete remission; REL, relapse.

Copyright © 2023 American Society for Clinical Investigation
ISSN 2379-3708

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