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Identification of Wee1 as a target in combination with avapritinib for gastrointestinal stromal tumor treatment
Shuai Ye, Dinara Sharipova, Marya Kozinova, Lilli Klug, Jimson D’Souza, Martin G. Belinsky, Katherine J. Johnson, Margret B. Einarson, Karthik Devarajan, Yan Zhou, Samuel Litwin, Michael C. Heinrich, Ronald DeMatteo, Margaret von Mehren, James S. Duncan, Lori Rink
Shuai Ye, Dinara Sharipova, Marya Kozinova, Lilli Klug, Jimson D’Souza, Martin G. Belinsky, Katherine J. Johnson, Margret B. Einarson, Karthik Devarajan, Yan Zhou, Samuel Litwin, Michael C. Heinrich, Ronald DeMatteo, Margaret von Mehren, James S. Duncan, Lori Rink
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Research Article Oncology Therapeutics

Identification of Wee1 as a target in combination with avapritinib for gastrointestinal stromal tumor treatment

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Abstract

Management of gastrointestinal stromal tumors (GISTs) has been revolutionized by the identification of activating mutations in KIT and PDGFRA and clinical application of RTK inhibitors in advanced disease. Stratification of GISTs into molecularly defined subsets provides insight into clinical behavior and response to approved targeted therapies. Although these RTK inhibitors are effective in most GISTs, resistance remains a significant clinical problem. Development of effective treatment strategies for refractory GISTs requires identification of novel targets to provide additional therapeutic options. Global kinome profiling has the potential to identify critical signaling networks and reveal protein kinases essential in GISTs. Using multiplexed inhibitor beads and mass spectrometry, we explored the majority of the kinome in GIST specimens from the 3 most common molecular subtypes (KIT mutant, PDGFRA mutant, and succinate dehydrogenase deficient) to identify kinase targets. Kinome profiling with loss-of-function assays identified an important role for G2/M tyrosine kinase, Wee1, in GIST cell survival. In vitro and in vivo studies revealed significant efficacy of MK-1775 (Wee1 inhibitor) in combination with avapritinib in KIT mutant and PDGFRA mutant GIST cell lines as well as notable efficacy of MK-1775 as a monotherapy in the engineered PDGFRA mutant line. These studies provide strong preclinical justification for the use of MK-1775 in GIST.

Authors

Shuai Ye, Dinara Sharipova, Marya Kozinova, Lilli Klug, Jimson D’Souza, Martin G. Belinsky, Katherine J. Johnson, Margret B. Einarson, Karthik Devarajan, Yan Zhou, Samuel Litwin, Michael C. Heinrich, Ronald DeMatteo, Margaret von Mehren, James S. Duncan, Lori Rink

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Figure 6

The combination of MK-1775 and avapritinib significantly inhibits GIST growth in vivo and improves disease-specific survival.

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The combination of MK-1775 and avapritinib significantly inhibits GIST g...
(A) Statistically significant decreases in the rate of GIST-T1+Cas9 xenograft tumor growth were observed due to treatment with avapritinib (*P = 0.05, black) and avapritinib+MK-1775 combination (**P = 0.002, green) compared with vehicle group (blue) on day 11. (B) Statistically significant decreases in the rate of GIST-T1+D842V KITKO xenograft tumor growth were observed due to treatment with avapritinib (**P = 0.002) and MK-1775 (*P = 0.02) and avapritinib+MK-1775 (***P ≤ 0.0002) compared with vehicle group on day 15. Smoothed tumor growth curves (tumor volume vs. time) were computed for each treatment using the lowess smoother in the R statistical language. (C) Kaplan-Meier estimate of the probability of disease-specific survival of GIST-T1+Cas9 xenografts. Statistically significant differences (even after adjusting for multiple testing) in disease-specific survival were observed between the following comparisons: vehicle vs. avapritinib (P < 0.0001); vehicle vs. avapritinib/MK-1775 (P < 0.0001); and MK-1775 vs. avapritinib/MK-1775 (P < 0.0001). (D) Kaplan-Meier estimate of the probability of disease-specific survival of GIST-T1+D842V KITKO xenografts. Statistically significant differences (even after adjusting for multiple testing) in disease-specific survival were observed between the following comparisons: vehicle vs. MK-1775 (P = 0.01); vehicle vs. avapritinib (P < 0.0001); vehicle vs. avapritinib/MK-1775 (P < 0.0001); MK-1775 vs. avapritinib/MK-1775 (P = 0.01); and avapritinib vs. avapritinib/MK-1775 (P = 0.02). The overall test is also significant (P < 0.0001). GIST, gastrointestinal stromal tumor.

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