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p300 suppresses the transition of myelodysplastic syndromes to acute myeloid leukemia
Na Man, Gloria Mas, Daniel L. Karl, Jun Sun, Fan Liu, Qin Yang, Miguel Torres-Martin, Hidehiro Itonaga, Concepcion Martinez, Shi Chen, Ye Xu, Stephanie Duffort, Pierre-Jacques Hamard, Chuan Chen, Beth E. Zucconi, Luisa Cimmino, Feng-Chun Yang, Mingjiang Xu, Philip A. Cole, Maria E. Figueroa, Stephen D. Nimer
Na Man, Gloria Mas, Daniel L. Karl, Jun Sun, Fan Liu, Qin Yang, Miguel Torres-Martin, Hidehiro Itonaga, Concepcion Martinez, Shi Chen, Ye Xu, Stephanie Duffort, Pierre-Jacques Hamard, Chuan Chen, Beth E. Zucconi, Luisa Cimmino, Feng-Chun Yang, Mingjiang Xu, Philip A. Cole, Maria E. Figueroa, Stephen D. Nimer
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Research Article Hematology

p300 suppresses the transition of myelodysplastic syndromes to acute myeloid leukemia

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Abstract

Myelodysplastic syndromes (MDS) are hematopoietic stem and progenitor cell (HSPC) malignancies characterized by ineffective hematopoiesis and an increased risk of leukemia transformation. Epigenetic regulators are recurrently mutated in MDS, directly implicating epigenetic dysregulation in MDS pathogenesis. Here, we identified a tumor suppressor role of the acetyltransferase p300 in clinically relevant MDS models driven by mutations in the epigenetic regulators TET2, ASXL1, and SRSF2. The loss of p300 enhanced the proliferation and self-renewal capacity of Tet2-deficient HSPCs, resulting in an increased HSPC pool and leukemogenicity in primary and transplantation mouse models. Mechanistically, the loss of p300 in Tet2-deficient HSPCs altered enhancer accessibility and the expression of genes associated with differentiation, proliferation, and leukemia development. Particularly, p300 loss led to an increased expression of Myb, and the depletion of Myb attenuated the proliferation of HSPCs and improved the survival of leukemia-bearing mice. Additionally, we show that chemical inhibition of p300 acetyltransferase activity phenocopied Ep300 deletion in Tet2-deficient HSPCs, whereas activation of p300 activity with a small molecule impaired the self-renewal and leukemogenicity of Tet2-deficient cells. This suggests a potential therapeutic application of p300 activators in the treatment of MDS with TET2 inactivating mutations.

Authors

Na Man, Gloria Mas, Daniel L. Karl, Jun Sun, Fan Liu, Qin Yang, Miguel Torres-Martin, Hidehiro Itonaga, Concepcion Martinez, Shi Chen, Ye Xu, Stephanie Duffort, Pierre-Jacques Hamard, Chuan Chen, Beth E. Zucconi, Luisa Cimmino, Feng-Chun Yang, Mingjiang Xu, Philip A. Cole, Maria E. Figueroa, Stephen D. Nimer

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Figure 4

Enhanced proliferation and leukemogenicity of Tet2-null HSPCs after p300 loss are associated with increased Myb expression.

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Enhanced proliferation and leukemogenicity of Tet2-null HSPCs after p300...
(A) Overlap of the upregulated genes and the genes annotated to gained enhancers in Ep300Δ/ΔTet2–/– cells compared with Tet2–/– cells. (B) Quantitative RT-PCR analysis of the expression levels of Myb in independent biological replicates of HSPCs from Ep300Δ/ΔTet2–/– and Tet2–/– mice. (C) ChEA of the DE genes in Ep300Δ/ΔTet2–/– HSPCs compared with Tet2-null HSPCs. (D) Overlap of the DE genes in Ep300Δ/ΔTet2–/– HSPCs compared with Tet2-null HSPCs and Myb targets identified by ChIP-Seq. A total of 2974 Myb targets were identified from the ChIP-Seq data, and 350 of them were also DE genes. (E) Enrichr-Hallmarks analysis of the 303 downregulated genes identified as Myb targets. (F) Number of colonies obtained after 1 week of culture of 10,000 plated HSPCs from Ep300Δ/ΔTet2–/– and Tet2–/– mice after Myb knockdown (Myb-KD) and cultured in methocult M3434 for 1 week. (G) Kaplan-Meier survival curves of mice receiving Myb-KD-leukemia cells from Ep300Δ/ΔTet2–/– mice. P values were determined using a 2-tailed Student’s t test for B and a 2-way ANOVA test for F. HSPCs, hematopoietic stem and progenitor cells; ChEA, ChIP-X Enrichment analysis; DE, differentially expressed.

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