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Multiexon deletion alleles of ATF6 linked to achromatopsia
Eun-Jin Lee, … , Joseph Carroll, Jonathan H. Lin
Eun-Jin Lee, … , Joseph Carroll, Jonathan H. Lin
Published April 9, 2020
Citation Information: JCI Insight. 2020;5(7):e136041. https://doi.org/10.1172/jci.insight.136041.
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Research Article Ophthalmology

Multiexon deletion alleles of ATF6 linked to achromatopsia

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Abstract

Achromatopsia (ACHM) is an autosomal recessive disease that results in severe visual loss. Symptoms of ACHM include impaired visual acuity, nystagmus, and photoaversion starting from infancy; furthermore, ACHM is associated with bilateral foveal hypoplasia and absent or severely reduced cone photoreceptor function on electroretinography. Here, we performed genetic sequencing in 3 patients from 2 families with ACHM, identifying and functionally characterizing 2 mutations in the activating transcription factor 6 (ATF6) gene. We identified a homozygous deletion covering exons 8–14 of the ATF6 gene from 2 siblings from the same family. In another patient from a different family, we identified a heterozygous deletion covering exons 2 and 3 of the ATF6 gene found in trans with a previously identified ATF6 c.970C>T (p.Arg324Cys) ACHM disease allele. Recombinant ATF6 proteins bearing these exon deletions showed markedly impaired transcriptional activity by qPCR and RNA-Seq analysis compared with WT-ATF6. Finally, RNAscope revealed that ATF6 and the related ATF6B transcripts were expressed in cones as well as in all retinal layers in normal human retina. Overall, our data identify loss-of-function ATF6 disease alleles that cause human foveal disease.

Authors

Eun-Jin Lee, Wei-Chieh Jerry Chiang, Heike Kroeger, Chloe Xiaoke Bi, Daniel L. Chao, Dorota Skowronska-Krawczyk, Rebecca R. Mastey, Stephen H. Tsang, Leon Chea, Kyle Kim, Scott R. Lambert, Julia M.D. Grandjean, Britta Baumann, Isabelle Audo, Susanne Kohl, Anthony T. Moore, R. Luke Wiseman, Joseph Carroll, Jonathan H. Lin

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Figure 5

Confocal micrographs of vertical sections of RNAscope in situ hybridization.

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Confocal micrographs of vertical sections of RNAscope in situ hybridizat...
Vertical section triple labeled with Arr3 (green), ATF6 (red), and ATF6B (white) mRNA in normal human retina. Nuclei were labeled with DAPI (blue) to identify the nuclear layers of the retina. The mRNA probe for Arr3 was found in the cell bodies and inner segments of cones, and the mRNA probes for ATF6 (red) and ATF6B (white) were observed in all the retinal layers. In the merged image, ATF6 and ATF6B mRNA puncta were localized within the cell bodies that are labeled with Arr3 in the outer nuclear layer (ONL). Three sets of independent experiments were performed (n = 2 retinas). Expression of ATF6 and ATF6B puncta was localized in the ONL, outer plexiform layer (OPL), inner nuclear layer (INL), inner plexiform layer (IPL), and ganglion cell layer (GCL). Scale bar: 10 μm.

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