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Molecular determinants of response to high-dose androgen therapy in prostate cancer
Michael D. Nyquist, Alexandra Corella, Osama Mohamad, Ilsa Coleman, Arja Kaipainen, Daniel A. Kuppers, Jared M. Lucas, Patrick J. Paddison, Stephen R. Plymate, Peter S. Nelson, Elahe A. Mostaghel
Michael D. Nyquist, Alexandra Corella, Osama Mohamad, Ilsa Coleman, Arja Kaipainen, Daniel A. Kuppers, Jared M. Lucas, Patrick J. Paddison, Stephen R. Plymate, Peter S. Nelson, Elahe A. Mostaghel
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Research Article Genetics Oncology

Molecular determinants of response to high-dose androgen therapy in prostate cancer

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Abstract

Clinical trials of high-dose androgen (HDA) therapy for prostate cancer (PC) have shown promising efficacy but are limited by lack of criteria to identify likely responders. To elucidate factors that govern the growth-repressive effects of HDAs, we applied an unbiased integrative approach using genetic screens and transcriptional profiling of PC cells with or without demonstrated phenotypic sensitivity to androgen-mediated growth repression. Through this comprehensive analysis, we identified genetic events and related signaling networks that determine the response to both HDA and androgen withdrawal. We applied these findings to develop a gene signature that may serve as an early indicator of treatment response and identify men with tumors that are amenable to HDA therapy.

Authors

Michael D. Nyquist, Alexandra Corella, Osama Mohamad, Ilsa Coleman, Arja Kaipainen, Daniel A. Kuppers, Jared M. Lucas, Patrick J. Paddison, Stephen R. Plymate, Peter S. Nelson, Elahe A. Mostaghel

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Figure 5

Focused CRISPR/CAS9 screens identify AR-responsive genes that mediate sensitivity to high-dose androgen.

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Focused CRISPR/CAS9 screens identify AR-responsive genes that mediate se...
(A) Gene enrichment ranks as measured by MAGECK analysis of 2 biological replicates of an AR-focused CRISPR/CAS9 screen. Known tumor suppressors enriched in both biological replicates are labeled. (B) Gene depletion ranks of 2 biological replicates. Genes associated with prostate cancer growth and progression are labeled. (C) RNA-seq gene expression heatmaps of mean-centered log2(CPM) values representing genes identified in the whole-genome and focused CRISPR screens. (D) sgRNA depletion rank plot of biphasic genes. (E) Median depletion ranks for biphasic genes (green) compared with all other genes (blue). Bars represent Q1 and Q3 quartile ranges.

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