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Mutant p53 induces a hypoxia transcriptional program in gastric and esophageal adenocarcinoma
Nilay Sethi, Osamu Kikuchi, James McFarland, Yanxi Zhang, Max Chung, Nicholas Kafker, Mirazul Islam, Benjamin Lampson, Abhishek Chakraborty, William G. Kaelin Jr., Adam J. Bass
Nilay Sethi, Osamu Kikuchi, James McFarland, Yanxi Zhang, Max Chung, Nicholas Kafker, Mirazul Islam, Benjamin Lampson, Abhishek Chakraborty, William G. Kaelin Jr., Adam J. Bass
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Research Article Oncology

Mutant p53 induces a hypoxia transcriptional program in gastric and esophageal adenocarcinoma

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Abstract

Despite the propensity for gastric and esophageal adenocarcinomas to select for recurrent missense mutations in TP53, the precise functional consequence of these mutations remains unclear. Here we report that endogenous mRNA and protein levels of mutant p53 were elevated in cell lines and patients with gastric and esophageal cancer. Functional studies showed that mutant p53 was sufficient, but not necessary, for enhancing primary tumor growth in vivo. Unbiased genome-wide transcriptome analysis revealed that hypoxia signaling was induced by mutant p53 in 2 gastric cancer cell lines. Using real-time in vivo imaging, we confirmed that hypoxia reporter activity was elevated during the initiation of mutant p53 gastric cancer xenografts. Further investigation revealed that, like mutant p53, the HIF1/ARNT hypoxia pathway was not required for the primary tumor functions of advanced mutant p53 gastric cancer. These findings indicate that recurrent p53 mutations in gastroesophageal adenocarcinoma are unlikely to serve as effective therapeutic targets in advanced cancer. However, in elucidating the contribution of missense mutant p53 and hypoxia signaling, the results suggest hypotheses regarding how these recurrent genomic events may contribute to gastric and esophageal adenocarcinoma formation.

Authors

Nilay Sethi, Osamu Kikuchi, James McFarland, Yanxi Zhang, Max Chung, Nicholas Kafker, Mirazul Islam, Benjamin Lampson, Abhishek Chakraborty, William G. Kaelin Jr., Adam J. Bass

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Figure 2

Mutant p53 is not required for primary tumor functions of gastroesophageal cancer cells.

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Mutant p53 is not required for primary tumor functions of gastroesophage...
(A) Immunoblot showing protein expression levels of p53 in the LMSU gastric adenocarcinoma cell line, which harbors an endogenous R175H p53 mutation, stably expressing a Cas9 control (con) vector or 2 distinct targeting sgRNAs in addition to Cas9. (B) Immunoblot showing protein expression levels of p53 in LMSU gastric cancer cells expressing an inducible vector control, scrambled (Scram) control, or 2 targeting shRNAs with or without doxycycline (Dox). (C) Proliferation of LMSU gastric adenocarcinoma cells expressing a constitutively active vector control, scrambled control, or 2 p53-targeting shRNAs using CellTiter-Glo. (D) Proliferation of Eso51 nonadherent esophageal cancer cells (R175H) stably expressing firefly luciferase in addition to a constitutively active Cas9 control vector or 2 p53-targeting sgRNAs using a luciferase assay. (E) Soft agar colony formation assay of Eso51 esophageal adenocarcinoma cells (R175H) stably expressing a constitutively active Cas9 control vector or 1 p53-targeting sgRNA. (F) Quantification of soft agar colony formation assay shown in E. (G and H) TP53 dependency scores for GEA cell lines derived from the CCLE, with damaging (nonsense/frameshift) mutations, hotspot (R175H, R248Q/W, R273C/H) mutations, or missense mutations or WTTP53 using (G) CRISPR and (H) RNAi dependency data. Lines within boxes represent median, the bounds of the boxes represent the 25th and 75th percentiles, and the whiskers extend to the lowest/largest values within 1.5 IQR from the lower and upper quartiles, respectively. P values were calculated by Wilcoxon’s rank-sum test

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