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Chromatin remodeler HELLS maintains glioma stem cells through E2F3 and MYC
Guoxin Zhang, Zhen Dong, Briana C. Prager, Leo J.K. Kim, Qiulian Wu, Ryan C. Gimple, Xiuxing Wang, Shideng Bao, Petra Hamerlik, Jeremy N. Rich
Guoxin Zhang, Zhen Dong, Briana C. Prager, Leo J.K. Kim, Qiulian Wu, Ryan C. Gimple, Xiuxing Wang, Shideng Bao, Petra Hamerlik, Jeremy N. Rich
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Research Article Oncology Stem cells

Chromatin remodeler HELLS maintains glioma stem cells through E2F3 and MYC

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Abstract

Glioblastomas, which contain stem cell–like glioblastoma stem cells (GSCs), are universally lethal cancers. While neural stem cells (NSCs) are usually quiescent, single-cell studies suggest that proliferating glioblastoma cells reside in the GSC population. Interrogating in silico glioma databases for epigenetic regulators that correlate with cell cycle regulation, we identified the chromatin remodeler HELLS as a potential target in glioblastoma. GSCs preferentially expressed HELLS compared with their differentiated tumor progeny and nonmalignant brain cells. Targeting HELLS disrupted GSC proliferation, survival, and self-renewal with induction of replication stress and DNA damage. Investigating potential molecular mechanisms downstream of HELLS revealed that HELLS interacted with the core oncogenic transcription factors, E2F3 and MYC, to regulate gene expression critical to GSC proliferation and maintenance. Supporting the interaction, HELLS expression strongly correlated with targets of E2F3 and MYC transcriptional activity in glioblastoma patients. The potential clinical significance of HELLS was reinforced by improved survival of tumor-bearing mice upon targeting HELLS and poor prognosis of glioma patients with elevated HELLS expression. Collectively, targeting HELLS may permit the functional disruption of the relatively undruggable MYC and E2F3 transcription factors and serve as a novel therapeutic paradigm for glioblastoma.

Authors

Guoxin Zhang, Zhen Dong, Briana C. Prager, Leo J.K. Kim, Qiulian Wu, Ryan C. Gimple, Xiuxing Wang, Shideng Bao, Petra Hamerlik, Jeremy N. Rich

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Figure 5

Targeting HELLS reduces GSC cell cycle progression.

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Targeting HELLS reduces GSC cell cycle progression.
(A) Flow cytometry o...
(A) Flow cytometry of EdU incorporation after 2-hour incubation with 10 μM EdU in GSC 387 analyzed 48 hours after HELLS knockdown. The y axis was gated by SSC, and the x axis was gated by EdU signals. Three independent experiments were performed. (B) Quantification of EdU+ cells from A. Data are presented as mean ± SD. *P < 0.05, ***P < 0.001, by 1-way ANOVA with Tukey’s multiple comparisons test. Three biologic replicates were used. (C) Flow cytometry of EdU incorporation assays after 2-hour incubation with 10 μM EdU in GSC 3565 analyzed 48 hours after HELLS knockdown. The y axis was gated by SSC, and the x axis was gated by EdU signals. Three independent experiments were performed. (D) Quantification of EdU+ cells from C. Data are presented as mean ± SD. **P < 0.01, ***P < 0.001, by 1-way ANOVA with Tukey’s comparison test. Three biologic replicates were used. (E and F) Ki67 staining in GSC 387 (E) and 3565 (F) after HELLS knockdown. Ki67 signals are shown as green and DAPI as blue. Three independent experiments were performed. Scale bars: 20 μm. (G)Quantification of Ki67+ cells in GSC 387 (top) and 3565 (bottom) after HELLS knockdown. Data are presented as mean ± SD. ***P < 0.001, by 1-way ANOVA with Tukey’s multiple comparisons test. For GSC 387: shCONT, n = 6; shHELLS.1744, n = 6; shHELLS.1308, n = 6. For GSC 3565: shCONT, n = 7; shHELLS.1744, n = 8; shHELLS.1308, n = 7.

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