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Transcriptional targeting of oncogene addiction in medullary thyroid cancer
Anisley Valenciaga, Motoyasu Saji, Lianbo Yu, Xiaoli Zhang, Ceimoani Bumrah, Ayse S. Yilmaz, Christina M. Knippler, Wayne Miles, Thomas J. Giordano, Gilbert J. Cote, Matthew D. Ringel
Anisley Valenciaga, Motoyasu Saji, Lianbo Yu, Xiaoli Zhang, Ceimoani Bumrah, Ayse S. Yilmaz, Christina M. Knippler, Wayne Miles, Thomas J. Giordano, Gilbert J. Cote, Matthew D. Ringel
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Research Article Endocrinology Oncology

Transcriptional targeting of oncogene addiction in medullary thyroid cancer

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Abstract

Metastatic medullary thyroid cancer (MTC) is incurable and FDA-approved kinase inhibitors that include oncogenic RET as a target do not result in complete responses. Association studies of human MTCs and murine models suggest that the CDK/RB pathway may be an alternative target. The objective of this study was to determine if CDKs represent therapeutic targets for MTC and to define mechanisms of activity. Using human MTC cells that are either sensitive or resistant to vandetanib, we demonstrate that palbociclib (CDK4/6 inhibitor) is not cytotoxic to MTC cells but that they are highly sensitive to dinaciclib (CDK1/2/5/9 inhibitor) accompanied by reduced CDK9 and RET protein and mRNA levels. CDK9 protein was highly expressed in 83 of 83 human MTCs and array–comparative genomic hybridization had copy number gain in 11 of 30 tumors. RNA sequencing demonstrated that RNA polymerase II–dependent transcription was markedly reduced by dinaciclib. The CDK7 inhibitor THZ1 also demonstrated high potency and reduced RET and CDK9 levels. ChIP-sequencing using H3K27Ac antibody identified a superenhancer in intron 1 of RET. Finally, combined inhibition of dinaciclib with a RET kinase inhibitor was synergistic. In summary, we have identified what we believe is a novel mechanism of RET transcription regulation that potentially can be exploited to improve RET therapeutic targeting.

Authors

Anisley Valenciaga, Motoyasu Saji, Lianbo Yu, Xiaoli Zhang, Ceimoani Bumrah, Ayse S. Yilmaz, Christina M. Knippler, Wayne Miles, Thomas J. Giordano, Gilbert J. Cote, Matthew D. Ringel

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Figure 6

Downregulation of RET protein and mRNA in TT and MZ-CRC-1 cells with dinaciclib treatment.

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Downregulation of RET protein and mRNA in TT and MZ-CRC-1 cells with din...
Western blots were performed with protein extracts form TT and MZ-CRC-1 cells treated with dinaciclib or vehicle control for 72 hours. Total RET protein levels were reduced with treatment while phosphorylation of RET and ERK indicate RET pathway activation (A). Treatment with dinaciclib showed a reduction in RET mRNA (B). RT-qPCR data were normalized to the 0 nM (vehicle control) samples and represented as relative expression. Each biological replicate was done in duplicate, and the error bars represent the standard deviation. One-way ANOVA tests were performed for the ΔCt values. *P < 0.001, #P < 0.01, +P < 0.05. ns, not significant. ^β-Actin for RET, ERK 1/2, and p-Thr202/Tyr204 ERK 1/2 in MZ-CRC-1 cells is the same because they were blotted on the same membrane.

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